Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc06g066680.2.1 | Tomato | cytosol | 97.46 | 97.46 |
PGSC0003DMT400014293 | Potato | cytosol, mitochondrion, plastid | 71.43 | 76.01 |
AT1G79900.1 | Thale cress | cytosol | 69.21 | 73.65 |
KRH09864 | Soybean | cytosol, mitochondrion, plastid | 67.94 | 72.79 |
KRH23460 | Soybean | cytosol, mitochondrion, plastid | 67.94 | 72.54 |
KRH47042 | Soybean | cytosol, mitochondrion, plastid | 68.25 | 70.96 |
GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 68.89 | 70.0 |
CDY58780 | Canola | cytosol, mitochondrion, plastid | 68.57 | 69.23 |
KRH44361 | Soybean | cytosol, mitochondrion, plastid | 66.35 | 68.98 |
CDX87281 | Canola | cytosol, mitochondrion, plastid | 68.25 | 68.91 |
Bra035205.1-P | Field mustard | cytosol, mitochondrion, plastid | 68.25 | 68.91 |
Os01t0225000-00 | Rice | cytosol | 64.76 | 63.35 |
GSMUA_Achr6P14120_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion | 64.76 | 63.16 |
TraesCS3A01G149900.1 | Wheat | cytosol | 64.76 | 62.96 |
TraesCS3B01G177000.1 | Wheat | cytosol | 64.44 | 62.65 |
TraesCS3D01G157800.1 | Wheat | cytosol | 64.13 | 62.35 |
Zm00001d008974_P001 | Maize | cytosol | 61.59 | 57.91 |
KXG31527 | Sorghum | cytosol, nucleus, peroxisome | 61.9 | 55.08 |
PGSC0003DMT400019719 | Potato | cytosol | 10.48 | 38.37 |
PGSC0003DMT400005377 | Potato | cytosol | 31.11 | 33.45 |
PGSC0003DMT400021041 | Potato | cytosol, mitochondrion, plastid | 31.11 | 33.0 |
PGSC0003DMT400058719 | Potato | cytosol, mitochondrion, nucleus | 28.25 | 29.18 |
PGSC0003DMT400076450 | Potato | cytosol, endoplasmic reticulum, mitochondrion | 27.62 | 26.61 |
PGSC0003DMT400028643 | Potato | cytosol, mitochondrion, nucleus | 25.71 | 23.41 |
PGSC0003DMT400037834 | Potato | cytosol | 20.95 | 20.82 |
PGSC0003DMT400052443 | Potato | vacuole | 21.59 | 20.8 |
PGSC0003DMT400047378 | Potato | cytosol | 18.73 | 20.42 |
PGSC0003DMT400041633 | Potato | cytosol | 20.63 | 20.06 |
PGSC0003DMT400081953 | Potato | cytosol, peroxisome, plastid | 18.1 | 19.19 |
PGSC0003DMT400043390 | Potato | cytosol, plastid | 22.54 | 17.03 |
Protein Annotations
Gene3D:1.50.40.10 | EntrezGene:102579662 | MapMan:24.2.13 | GO:GO:0000064 | GO:GO:0003674 | GO:GO:0005215 |
GO:GO:0005290 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
GO:GO:0006561 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006972 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0015181 | GO:GO:0015189 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0055085 | GO:GO:0089709 | GO:GO:1903352 | GO:GO:1903401 | GO:GO:1903826 |
InterPro:IPR018108 | InterPro:IPR023395 | UniProt:M1BDE1 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
PFAM:PF00153 | EnsemblPlantsGene:PGSC0003DMG400016535 | PGSC:PGSC0003DMG400016535 | EnsemblPlants:PGSC0003DMT400042642 | PRINTS:PR00926 | PFscan:PS50920 |
PANTHER:PTHR24089 | PANTHER:PTHR24089:SF70 | SUPFAM:SSF103506 | UniParc:UPI00029531D5 | RefSeq:XP_006356159.1 | SEG:seg |
Description
Mitochondrial carnitine/acylcarnitine carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016535]
Coordinates
chr6:-:49323065..49326779
Molecular Weight (calculated)
34848.0 Da
IEP (calculated)
9.939
GRAVY (calculated)
-0.050
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFWPEFLAS SWGKEFVAGG FGGIAGIVSG YPLDTIRVRQ QSCTPGSAFN ILRHVAATEG PLALYRGMAA PLASVTFQNA MVFQIYAVLS RAFDRNAPAS
101: DPPSYKGVAL GGFGTGALQS LMLTPVELVK IRLQLQQRNI LDNKKQKTSC KGPTDVARNI FRQEGWRGIY RGLTITVLRD APAHGLYFWT YEYVREQLHP
201: GCRKNGQESF RTMLIAGGLA GVASWICCYP LDVIKTRFQA QSQSTPLRYT GIVDCFRRSV KHEGYNVLWR GLGTAVARAF VVNGAIFTAY ETALRCLFIN
301: NNNKVHANIQ TENAF
101: DPPSYKGVAL GGFGTGALQS LMLTPVELVK IRLQLQQRNI LDNKKQKTSC KGPTDVARNI FRQEGWRGIY RGLTITVLRD APAHGLYFWT YEYVREQLHP
201: GCRKNGQESF RTMLIAGGLA GVASWICCYP LDVIKTRFQA QSQSTPLRYT GIVDCFRRSV KHEGYNVLWR GLGTAVARAF VVNGAIFTAY ETALRCLFIN
301: NNNKVHANIQ TENAF
001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
Arabidopsis Description
BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.