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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g066680.2.1 Tomato cytosol 97.46 97.46
PGSC0003DMT400014293 Potato cytosol, mitochondrion, plastid 71.43 76.01
AT1G79900.1 Thale cress cytosol 69.21 73.65
KRH09864 Soybean cytosol, mitochondrion, plastid 67.94 72.79
KRH23460 Soybean cytosol, mitochondrion, plastid 67.94 72.54
KRH47042 Soybean cytosol, mitochondrion, plastid 68.25 70.96
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 68.89 70.0
CDY58780 Canola cytosol, mitochondrion, plastid 68.57 69.23
KRH44361 Soybean cytosol, mitochondrion, plastid 66.35 68.98
CDX87281 Canola cytosol, mitochondrion, plastid 68.25 68.91
Bra035205.1-P Field mustard cytosol, mitochondrion, plastid 68.25 68.91
Os01t0225000-00 Rice cytosol 64.76 63.35
GSMUA_Achr6P14120_001 Banana cytosol, endoplasmic reticulum, mitochondrion 64.76 63.16
TraesCS3A01G149900.1 Wheat cytosol 64.76 62.96
TraesCS3B01G177000.1 Wheat cytosol 64.44 62.65
TraesCS3D01G157800.1 Wheat cytosol 64.13 62.35
Zm00001d008974_P001 Maize cytosol 61.59 57.91
KXG31527 Sorghum cytosol, nucleus, peroxisome 61.9 55.08
PGSC0003DMT400019719 Potato cytosol 10.48 38.37
PGSC0003DMT400005377 Potato cytosol 31.11 33.45
PGSC0003DMT400021041 Potato cytosol, mitochondrion, plastid 31.11 33.0
PGSC0003DMT400058719 Potato cytosol, mitochondrion, nucleus 28.25 29.18
PGSC0003DMT400076450 Potato cytosol, endoplasmic reticulum, mitochondrion 27.62 26.61
PGSC0003DMT400028643 Potato cytosol, mitochondrion, nucleus 25.71 23.41
PGSC0003DMT400037834 Potato cytosol 20.95 20.82
PGSC0003DMT400052443 Potato vacuole 21.59 20.8
PGSC0003DMT400047378 Potato cytosol 18.73 20.42
PGSC0003DMT400041633 Potato cytosol 20.63 20.06
PGSC0003DMT400081953 Potato cytosol, peroxisome, plastid 18.1 19.19
PGSC0003DMT400043390 Potato cytosol, plastid 22.54 17.03
Protein Annotations
Gene3D:1.50.40.10EntrezGene:102579662MapMan:24.2.13GO:GO:0000064GO:GO:0003674GO:GO:0005215
GO:GO:0005290GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006561GO:GO:0006810GO:GO:0006950GO:GO:0006972GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009628GO:GO:0009987GO:GO:0015181GO:GO:0015189GO:GO:0016020
GO:GO:0016021GO:GO:0055085GO:GO:0089709GO:GO:1903352GO:GO:1903401GO:GO:1903826
InterPro:IPR018108InterPro:IPR023395UniProt:M1BDE1InterPro:Mit_carrierInterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sf
PFAM:PF00153EnsemblPlantsGene:PGSC0003DMG400016535PGSC:PGSC0003DMG400016535EnsemblPlants:PGSC0003DMT400042642PRINTS:PR00926PFscan:PS50920
PANTHER:PTHR24089PANTHER:PTHR24089:SF70SUPFAM:SSF103506UniParc:UPI00029531D5RefSeq:XP_006356159.1SEG:seg
Description
Mitochondrial carnitine/acylcarnitine carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016535]
Coordinates
chr6:-:49323065..49326779
Molecular Weight (calculated)
34848.0 Da
IEP (calculated)
9.939
GRAVY (calculated)
-0.050
Length
315 amino acids
Sequence
(BLAST)
001: MDFWPEFLAS SWGKEFVAGG FGGIAGIVSG YPLDTIRVRQ QSCTPGSAFN ILRHVAATEG PLALYRGMAA PLASVTFQNA MVFQIYAVLS RAFDRNAPAS
101: DPPSYKGVAL GGFGTGALQS LMLTPVELVK IRLQLQQRNI LDNKKQKTSC KGPTDVARNI FRQEGWRGIY RGLTITVLRD APAHGLYFWT YEYVREQLHP
201: GCRKNGQESF RTMLIAGGLA GVASWICCYP LDVIKTRFQA QSQSTPLRYT GIVDCFRRSV KHEGYNVLWR GLGTAVARAF VVNGAIFTAY ETALRCLFIN
301: NNNKVHANIQ TENAF
Best Arabidopsis Sequence Match ( AT1G79900.1 )
(BLAST)
001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
Arabidopsis Description
BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.