Factsheet for PGSC0003DMT400047378

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g007730.2.1	Tomato	cytosol	94.46	85.31
VIT_01s0026g02750.t01	Wine grape	cytosol	71.28	73.57
KRH34619	Soybean	cytosol	69.2	65.57
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	68.51	64.92
AT1G14140.1	Thale cress	mitochondrion	65.74	62.3
Bra026855.1-P	Field mustard	mitochondrion	65.05	61.04
CDY33772	Canola	mitochondrion	65.05	61.04
GSMUA_Achr6P30530_001	Banana	cytosol	34.6	59.88
KXG26414	Sorghum	plastid	61.59	59.33
TraesCS2B01G335300.1	Wheat	mitochondrion	60.55	57.76
Os04t0449000-02	Rice	cytosol	61.25	57.47
TraesCS2D01G315000.1	Wheat	plastid	59.86	57.28
Zm00001d003511_P001	Maize	mitochondrion	59.86	56.91
TraesCS2A01G317100.1	Wheat	cytosol, mitochondrion, plastid	60.55	54.52
PGSC0003DMT400037834	Potato	cytosol	34.26	31.23
PGSC0003DMT400041633	Potato	cytosol	34.95	31.17
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	31.83	30.98
PGSC0003DMT400052443	Potato	vacuole	33.56	29.66
PGSC0003DMT400005377	Potato	cytosol	23.88	23.55
PGSC0003DMT400019719	Potato	cytosol	6.57	22.09
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	21.8	21.21
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	25.26	21.1
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	21.11	20.61
PGSC0003DMT400043390	Potato	cytosol, plastid	28.72	19.9
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	20.42	19.34
PGSC0003DMT400042642	Potato	cytosol	20.42	18.73
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	19.72	17.43

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:102581449	MapMan:24.2.13	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0031966	InterPro:IPR018108	InterPro:IPR023395	UniProt:M1BKN0	InterPro:Mit_uncoupling_UCP-like
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG400018411	PGSC:PGSC0003DMG400018411	EnsemblPlants:PGSC0003DMT400047378
PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF347	SUPFAM:SSF103506	UniParc:UPI0002968331
RefSeq:XP_006355129.2	SEG:seg	:	:	:	:

Description

Mitochondrial carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018411]

Coordinates

chr5:+:4734615..4737869

Molecular Weight (calculated)

31896.0 Da

IEP (calculated)

10.233

GRAVY (calculated)

0.062

Length

289 amino acids

Sequence
(BLAST)

001: MKAQVFNDGR KAHTTKIAVT AMSAMAAETA TFPVDLIKTR LQLHGESLVS SRRISAVRVV AEILRNDGIL GLYKGLSPAI IRHMFYTPIR IVNYEFLRNS
101: LVPADHTLSL SSKAIIGGIS GVIAQVVASP ADLVKVRMQA DSRMVSQGLQ PRYCGPVDAF NKIIQTEGVR GLWKGMVPNV QRAFLVNMGE LACYDHAKRF
201: VINNNIANDD IYAHTLSSIM SGLSATTLSC PADVIKTRMM NQAADNQGNC KYKNSYDCLV KTIRVEGLKA LWKGFFPTWA RLGPWQFVF

Best Arabidopsis Sequence Match ( AT1G14140.1 )
(BLAST)

001: MERSRVTREA PTGTRILLAS LSAMVAESVT FPIDLTKTRM QLHGSGSASG AHRIGAFGVV SEIARKEGVI GLYKGLSPAI IRHLFYTPIR IIGYENLKGL
101: IVRSETNNSE SLPLATKALV GGFSGVIAQV VASPADLVKV RMQADGRLVS QGLKPRYSGP IEAFTKILQS EGVKGLWKGV LPNIQRAFLV NMGELACYDH
201: AKHFVIDKKI AEDNIFAHTL ASIMSGLAST SLSCPADVVK TRMMNQGENA VYRNSYDCLV KTVKFEGIRA LWKGFFPTWA RLGPWQFVFW VSYEKFRLLA
301: GISSF

Arabidopsis Description

PUMP3Mitochondrial uncoupling protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI74]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.