Factsheet for PGSC0003DMT400014293

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120100.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion	94.59	93.33
PGSC0003DMT400042642	Potato	cytosol	76.01	71.43
VIT_09s0002g04500.t01	Wine grape	cytosol, mitochondrion, plastid	69.59	66.24
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	65.2	62.26
TraesCS3A01G149900.1	Wheat	cytosol	64.19	58.64
TraesCS3D01G157800.1	Wheat	cytosol	63.85	58.33
TraesCS3B01G177000.1	Wheat	cytosol	63.85	58.33
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	63.18	57.89
Os01t0225000-00	Rice	cytosol	62.84	57.76
Zm00001d008974_P001	Maize	cytosol	61.15	54.03
KXG31527	Sorghum	cytosol, nucleus, peroxisome	61.49	51.41
PGSC0003DMT400019719	Potato	cytosol	10.47	36.05
PGSC0003DMT400005377	Potato	cytosol	33.78	34.13
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	33.11	33.0
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	27.7	26.89
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	29.05	26.3
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	25.34	21.68
PGSC0003DMT400037834	Potato	cytosol	22.97	21.45
PGSC0003DMT400047378	Potato	cytosol	20.61	21.11
PGSC0003DMT400041633	Potato	cytosol	22.3	20.37
PGSC0003DMT400052443	Potato	vacuole	21.96	19.88
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	18.58	18.52
PGSC0003DMT400043390	Potato	cytosol, plastid	25.0	17.75

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	UniProt:M1A3Z0	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	EnsemblPlantsGene:PGSC0003DMG401005606	PGSC:PGSC0003DMG401005606	EnsemblPlants:PGSC0003DMT400014293
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF649	SUPFAM:SSF103506	UniParc:UPI0002958FD7
SEG:seg	:	:	:	:	:

Description

Mitochondrial carnitine/acylcarnitine carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG401005606]

Coordinates

chr3:-:59476166..59477282

Molecular Weight (calculated)

32620.6 Da

IEP (calculated)

10.416

GRAVY (calculated)

-0.003

Length

296 amino acids

Sequence
(BLAST)

001: MEFWPEFLAS SWGKEFVAGG FGGIAGLISG YPLDSIRVRQ QNTKSGSAFN VFRHVVAKEG PLSLYRGMAA PLASVTFQNA MVFQIYAMLS RTFDRQILAS
101: DPPSYKGVAL GGIAAGAIQS LIISPVELVK IQLQLQSKTN QVTRLKGPRD VTRRIVRQAG LRGIYRGLTV TVLRDAHSHG LYFWVYEYTK EQLHPGCRKN
201: GHESFQTMLV AGGLAGSVSW ISCYPLDVVK TRLQAQSQSK TAKYHGIVDC FRQSVRTEGY GVLWRGVGTT VGRAFIVNGA IFTAYETALR FLCKPQ

Best Arabidopsis Sequence Match ( AT1G79900.1 )
(BLAST)

001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD

Arabidopsis Description

BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.