Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G177000.1 | Wheat | cytosol | 98.46 | 98.46 |
| TraesCS3A01G149900.1 | Wheat | cytosol | 98.46 | 98.46 |
| Os01t0225000-00 | Rice | cytosol | 84.26 | 84.78 |
| Zm00001d008974_P001 | Maize | cytosol | 78.4 | 75.82 |
| KXG31527 | Sorghum | cytosol, nucleus, peroxisome | 80.86 | 74.01 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 70.06 | 73.23 |
| GSMUA_Achr6P14120_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion | 71.6 | 71.83 |
| VIT_09s0002g04500.t01 | Wine grape | cytosol, mitochondrion, plastid | 65.12 | 67.85 |
| AT1G79900.1 | Thale cress | cytosol | 61.42 | 67.23 |
| KRH23460 | Soybean | cytosol, mitochondrion, plastid | 60.19 | 66.1 |
| KRH09864 | Soybean | cytosol, mitochondrion, plastid | 59.57 | 65.65 |
| KRH47042 | Soybean | cytosol, mitochondrion, plastid | 61.11 | 65.35 |
| Solyc06g066680.2.1 | Tomato | cytosol | 62.65 | 64.44 |
| PGSC0003DMT400042642 | Potato | cytosol | 62.35 | 64.13 |
| PGSC0003DMT400014293 | Potato | cytosol, mitochondrion, plastid | 58.33 | 63.85 |
| Bra035205.1-P | Field mustard | cytosol, mitochondrion, plastid | 61.42 | 63.78 |
| CDX87281 | Canola | cytosol, mitochondrion, plastid | 61.42 | 63.78 |
| CDY58780 | Canola | cytosol, mitochondrion, plastid | 60.8 | 63.14 |
| KRH44361 | Soybean | cytosol, mitochondrion, plastid | 58.02 | 62.05 |
| Solyc03g120100.2.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion | 57.1 | 61.67 |
| TraesCS1D01G195500.1 | Wheat | golgi | 31.17 | 34.12 |
| TraesCS4D01G305200.1 | Wheat | cytosol | 28.4 | 30.07 |
| TraesCS1D01G195400.1 | Wheat | golgi | 32.41 | 29.83 |
| TraesCS5D01G109300.2 | Wheat | plastid | 22.53 | 24.58 |
| TraesCS5D01G252800.1 | Wheat | cytosol | 23.77 | 23.84 |
| TraesCS4D01G194800.1 | Wheat | plastid | 23.77 | 23.62 |
| TraesCS2D01G315000.1 | Wheat | plastid | 20.99 | 22.52 |
| TraesCS3D01G204800.2 | Wheat | plasma membrane | 19.75 | 22.38 |
| TraesCS5D01G307000.1 | Wheat | cytosol | 22.22 | 22.36 |
| TraesCS4D01G134300.1 | Wheat | golgi | 20.68 | 22.04 |
| TraesCS3D01G136800.1 | Wheat | golgi | 16.98 | 17.92 |
| TraesCS1D01G129200.2 | Wheat | cytosol, extracellular, peroxisome | 15.74 | 16.89 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0000064 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005290 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006561 |
| GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006972 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0015181 | GO:GO:0015189 | GO:GO:0055085 | InterPro:IPR018108 |
| InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 | PRINTS:PR00926 |
| PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF438 | SUPFAM:SSF103506 | EnsemblPlantsGene:TraesCS3D01G157800 | EnsemblPlants:TraesCS3D01G157800.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:126234345..126236324
Molecular Weight (calculated)
35253.1 Da
IEP (calculated)
10.368
GRAVY (calculated)
0.016
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFWPEFLAS SGGHEFVAGG VGGMAGVLAG HPLDTLRIRL QQPPRPVSPG ITVARVARPP SAVALLRGIL RAEGPGALYR GMGAPLASVA FQNAMVFQVY
101: AILSRSLDRR MSTSEPPSYT SVALAGVGTG ALQTLILSPV ELVKIRLQLE AAGRKRQGPV DMVRDIMRRE GLRGIYRGLT VTALRDAPSH GVYFWTYEYA
201: RERLHPGCRS TGQESLATML VSGGLAGVAS WVCCYPLDVV KSRLQAQTQT HPPSPRYRGV VDCFRKSVRE EGLPVLWRGL GTAVARAFVV NGAIFSAYEL
301: ALRFLVRNNG RQTLVMEEMK CHDH
101: AILSRSLDRR MSTSEPPSYT SVALAGVGTG ALQTLILSPV ELVKIRLQLE AAGRKRQGPV DMVRDIMRRE GLRGIYRGLT VTALRDAPSH GVYFWTYEYA
201: RERLHPGCRS TGQESLATML VSGGLAGVAS WVCCYPLDVV KSRLQAQTQT HPPSPRYRGV VDCFRKSVRE EGLPVLWRGL GTAVARAFVV NGAIFSAYEL
301: ALRFLVRNNG RQTLVMEEMK CHDH
001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
Arabidopsis Description
BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.