Factsheet for VIT_09s0002g04500.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G79900.1	Thale cress	cytosol	69.77	73.31
KRH47042	Soybean	cytosol, mitochondrion, plastid	71.06	72.94
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	70.74	70.97
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	66.24	69.59
KRH44361	Soybean	cytosol, mitochondrion, plastid	67.52	69.31
KRH23460	Soybean	cytosol, mitochondrion, plastid	65.59	69.15
KRH09864	Soybean	cytosol, mitochondrion, plastid	65.27	69.05
Solyc03g120100.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion	65.92	68.33
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	68.49	68.27
CDX87281	Canola	cytosol, mitochondrion, plastid	68.49	68.27
CDY58780	Canola	cytosol, mitochondrion, plastid	68.49	68.27
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	68.81	66.25
TraesCS3D01G157800.1	Wheat	cytosol	67.85	65.12
TraesCS3B01G177000.1	Wheat	cytosol	67.2	64.51
TraesCS3A01G149900.1	Wheat	cytosol	66.88	64.2
Os01t0225000-00	Rice	cytosol	65.27	63.04
Zm00001d008974_P001	Maize	cytosol	64.95	60.3
KXG31527	Sorghum	cytosol, nucleus, peroxisome	64.31	56.5
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	27.97	28.71
VIT_00s0407g00020.t01	Wine grape	mitochondrion	12.86	28.37
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	31.19	28.36
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	25.72	26.14
VIT_01s0026g02750.t01	Wine grape	cytosol	22.51	25.0
VIT_07s0104g01160.t01	Wine grape	cytosol	21.54	21.54
VIT_06s0004g05940.t01	Wine grape	plasma membrane, vacuole	20.9	21.52
VIT_00s2349g00010.t01	Wine grape	cytosol	21.54	21.07
VIT_18s0001g07320.t01	Wine grape	cytosol	21.86	21.05
VIT_08s0007g01700.t01	Wine grape	extracellular	20.26	20.72
VIT_08s0007g07270.t01	Wine grape	cytosol, peroxisome, plastid	18.97	19.8
VIT_06s0004g00470.t01	Wine grape	cytosol	18.97	17.1
VIT_16s0039g00630.t01	Wine grape	cytosol	7.4	17.04
VIT_00s0827g00030.t01	Wine grape	extracellular	5.14	16.67

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100265259	wikigene:100265259	MapMan:24.2.13	ProteinID:CCB59474	ProteinID:CCB59474.1
UniProt:F6HYF1	EMBL:FN596494	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810
GO:GO:0006839	GO:GO:0006844	GO:GO:0006865	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0089709	GO:GO:1903352	GO:GO:1903401	GO:GO:1903826
InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100265259	wikigene:LOC100265259	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF70
SUPFAM:SSF103506	TIGR:TC51805	UniParc:UPI00015C8A9C	ArrayExpress:VIT_09s0002g04500	EnsemblPlantsGene:VIT_09s0002g04500	EnsemblPlants:VIT_09s0002g04500.t01
unigene:Vvi.6669	RefSeq:XP_002284619	RefSeq:XP_002284619.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:4090802..4093551

Molecular Weight (calculated)

33516.6 Da

IEP (calculated)

9.300

GRAVY (calculated)

0.015

Length

311 amino acids

Sequence
(BLAST)

001: MDFWPEFLAS SWGREFVAGG LGGMAGVVSG YPLDSLRIMQ QHSRSGSAMT ILRRVIATEG PGALYRGMGA PLASVTFQNA MVFQIYADLS RACDPLVAAK
101: DPPSYKGVAL GGVGTGAIQS LMLAPVELVK IRLQLQRKSY GETQPTNCYK GPVSVVKSIC RTEGIRGLYR GLTITVLRDA PSHGVYFSTY EYMREQLHPG
201: CRKTGQESLR TMLVAGGLAG VASWVCCYPL DVVKTRLQAQ SSSSPQKYSG IVDCFVKSVK EEGQGVLWRG LGTAVSRAFV VNGAIFAAYE FALRYLCNNN
301: GHGTIQTENT G

Best Arabidopsis Sequence Match ( AT1G79900.1 )
(BLAST)

001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD

Arabidopsis Description

BAC2Mitochondrial arginine transporter BAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA93]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.