Factsheet for VIT_02s0012g01250.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74426	Soybean	cytosol, mitochondrion, vacuole	76.02	87.54
KRH39532	Soybean	cytosol, mitochondrion, plastid	75.15	86.53
KRH75622	Soybean	cytosol, mitochondrion, vacuole	74.27	85.52
GSMUA_Achr5P13930_001	Banana	cytosol	73.98	85.47
KRH45454	Soybean	cytosol, mitochondrion, vacuole	73.68	84.85
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	73.39	84.51
Solyc10g079200.1.1	Tomato	plastid	72.51	83.5
PGSC0003DMT400005377	Potato	cytosol	71.34	83.28
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	71.93	83.11
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	72.22	82.06
Solyc06g061170.2.1	Tomato	plastid	54.39	81.22
Os10t0573700-01	Rice	mitochondrion	74.85	81.01
Os10t0573800-01	Rice	cytosol	69.88	80.74
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	70.18	80.54
CDX87675	Canola	cytosol, mitochondrion, plastid	70.18	80.54
EER91889	Sorghum	cytosol	69.3	80.07
CDY37150	Canola	cytosol, mitochondrion, plastid	70.18	80.0
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	73.1	79.87
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	69.01	79.73
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	69.01	79.73
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	69.59	79.33
CDY35182	Canola	cytosol, mitochondrion, plastid	69.59	79.33
TraesCS1D01G195500.1	Wheat	golgi	68.42	79.05
CDY03190	Canola	cytosol, mitochondrion, plastid	69.3	79.0
AT5G46800.2	Thale cress	cytosol	69.3	79.0
CDY58507	Canola	cytosol, mitochondrion, plastid	69.01	78.67
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	68.71	78.33
CDX77693	Canola	cytosol, mitochondrion, plastid	68.42	78.0
TraesCS1D01G195400.1	Wheat	golgi	74.27	72.16
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	75.44	66.67
HORVU1Hr1G050130.3	Barley	vacuole	44.44	47.06
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	28.95	32.67
VIT_09s0002g04500.t01	Wine grape	cytosol, mitochondrion, plastid	28.36	31.19
VIT_00s0407g00020.t01	Wine grape	mitochondrion	11.11	26.95
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	23.1	25.82
VIT_01s0026g02750.t01	Wine grape	cytosol	20.47	25.0
VIT_06s0004g05940.t01	Wine grape	plasma membrane, vacuole	21.34	24.17
VIT_08s0007g01700.t01	Wine grape	extracellular	21.34	24.01
VIT_08s0007g07270.t01	Wine grape	cytosol, peroxisome, plastid	20.76	23.83
VIT_00s2349g00010.t01	Wine grape	cytosol	20.18	21.7
VIT_18s0001g07320.t01	Wine grape	cytosol	20.47	21.67
VIT_07s0104g01160.t01	Wine grape	cytosol	18.71	20.58
VIT_06s0004g00470.t01	Wine grape	cytosol	20.18	20.0
VIT_16s0039g00630.t01	Wine grape	cytosol	6.14	15.56
VIT_00s0827g00030.t01	Wine grape	extracellular	3.51	12.5

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100257503	wikigene:100257503	MapMan:24.2.13	ProteinID:CCB57905	ProteinID:CCB57905.1
UniProt:F6HT95	EMBL:FN596247	GO:GO:0000064	GO:GO:0000066	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:1903352
InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100257503	wikigene:LOC100257503	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF640	SUPFAM:SSF103506	UniParc:UPI0002109E72
ArrayExpress:VIT_02s0012g01250	EnsemblPlantsGene:VIT_02s0012g01250	EnsemblPlants:VIT_02s0012g01250.t01	RefSeq:XP_002280380	RefSeq:XP_002280380.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:7361994..7365302

Molecular Weight (calculated)

35130.8 Da

IEP (calculated)

9.764

GRAVY (calculated)

0.201

Length

342 amino acids

Sequence
(BLAST)

001: MTGVLSWCLS YTVPTISNST ALQGPVVSLC KNLKHPVDIA PHCPNMADVA KDLTAGTVGG AAQLIVGHPF DTIKVKLQSQ PPPLPGQPPK FSGAMDAVRQ
101: TVAAEGPRGL YKGMGAPLAT VAAFNAVLFS VRGQMEALLR SQPGAPLTVN QQIVAGAGAG VAVSFLACPT ELIKCRLQAQ SALASSGSPG VAVKYGGPMD
201: VARHVIKSEG GVRGLFKGLV PTMAREIPGN AAMFGVYEAL KQYLAGGPDT SGLGRGSLIL AGGLAGASFW ASVYPTDVVK SVIQVDDYKN PKFSGSIDAF
301: RKTLASEGVK GLYKGFGPAM ARSVPANAAC FLAYEVTRSS LG

Best Arabidopsis Sequence Match ( AT5G46800.1 )
(BLAST)

001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG

Arabidopsis Description

BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.