Factsheet for VIT_10s0003g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50090	Soybean	cytosol	76.9	76.39
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	76.57	76.07
Solyc10g009090.2.1	Tomato	extracellular	75.91	75.41
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	67.66	74.55
KRH65469	Soybean	extracellular	29.37	70.63
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	68.98	68.75
KRH62946	Soybean	extracellular	24.42	68.52
CDY37683	Canola	cytosol, peroxisome, plastid	68.32	68.09
CDY57210	Canola	cytosol, peroxisome, plastid	68.32	68.09
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	73.27	67.89
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	65.68	65.03
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	67.66	64.26
Zm00001d032430_P002	Maize	mitochondrion	62.38	61.76
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	62.38	61.76
TraesCS4A01G407600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	61.72	61.11
TraesCS4D01G305200.1	Wheat	cytosol	61.72	61.11
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	61.39	60.78
Solyc02g077910.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	60.07	60.67
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	61.06	60.46
Os11t0423800-01	Rice	nucleus	27.39	58.04
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	32.67	28.95
VIT_09s0002g04500.t01	Wine grape	cytosol, mitochondrion, plastid	28.71	27.97
VIT_00s0407g00020.t01	Wine grape	mitochondrion	10.89	23.4
VIT_01s0026g02750.t01	Wine grape	cytosol	21.12	22.86
VIT_00s2349g00010.t01	Wine grape	cytosol	23.43	22.33
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	20.79	20.59
VIT_18s0001g07320.t01	Wine grape	cytosol	21.12	19.81
VIT_07s0104g01160.t01	Wine grape	cytosol	19.47	18.97
VIT_06s0004g05940.t01	Wine grape	plasma membrane, vacuole	18.81	18.87
VIT_08s0007g01700.t01	Wine grape	extracellular	18.81	18.75
VIT_08s0007g07270.t01	Wine grape	cytosol, peroxisome, plastid	17.49	17.79
VIT_06s0004g00470.t01	Wine grape	cytosol	17.82	15.65
VIT_16s0039g00630.t01	Wine grape	cytosol	5.94	13.33
VIT_00s0827g00030.t01	Wine grape	extracellular	3.96	12.5

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100255452	wikigene:100255452	MapMan:24.2.13	MapMan:4.1.1.3	ProteinID:CBI30592
ProteinID:CBI30592.3	UniProt:D7TJC0	EMBL:FN595992	GO:GO:0000064	GO:GO:0000066	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:1903352	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100255452	wikigene:LOC100255452	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF388	SUPFAM:SSF103506
TIGR:TC55393	TMHMM:TMhelix	UniParc:UPI00015CCCF5	ArrayExpress:VIT_10s0003g00060	EnsemblPlantsGene:VIT_10s0003g00060	EnsemblPlants:VIT_10s0003g00060.t01
unigene:Vvi.19373	RefSeq:XP_002280023	RefSeq:XP_002280023.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:-:1349500..1357030

Molecular Weight (calculated)

32862.0 Da

IEP (calculated)

9.974

GRAVY (calculated)

0.032

Length

303 amino acids

Sequence
(BLAST)

001: MEETSGYKEY VAGLLAGVAT VGIGHPFDTV KVKLQKHNTE AHGMKYKNGL HCTARIVKSE GVKGLYRGAT SSFLGMAFES SLLFGIYSRT KQKMQEGLQN
101: TRPQPQVIIP SAAYSGAIIS FVLCPSELLK CRMQIQGTDS LVPKSSRYSS PLDCALKTMK TEGVTGIFRG GLTTLLRESF GNAVFFSVYE YVRYYMHLQL
201: KAASSDHNDL IDVGIGIVTG GLGGVAFWSA VLPLDVAKTI IQTASDKSST KNPFRILNSI YRRAGLRGCY TGLGPTIARA FPANAAAIVT WELAIKLLGI
301: KRE

Best Arabidopsis Sequence Match ( AT2G33820.1 )
(BLAST)

001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D

Arabidopsis Description

ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.