Factsheet for TraesCS4A01G407600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, mitochondrion
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G305200.1	Wheat	cytosol	98.04	98.04
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	97.39	97.39
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	94.12	94.12
Os11t0423800-01	Rice	nucleus	39.54	84.62
Zm00001d032430_P002	Maize	mitochondrion	84.31	84.31
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	84.31	84.31
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	65.69	65.69
KRH50090	Soybean	cytosol	62.09	62.3
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	55.56	61.82
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	61.11	61.72
Solyc10g009090.2.1	Tomato	extracellular	60.78	60.98
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	60.46	60.66
KRH65469	Soybean	extracellular	24.84	60.32
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	59.48	59.87
CDY37683	Canola	cytosol, peroxisome, plastid	58.82	59.21
CDY57210	Canola	cytosol, peroxisome, plastid	58.5	58.88
KRH62946	Soybean	extracellular	20.59	58.33
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	62.09	58.1
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	59.15	56.74
Solyc02g077910.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	50.65	51.67
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	33.33	34.46
TraesCS3A01G149900.1	Wheat	cytosol	30.72	29.01
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	33.33	26.36
TraesCS4A01G179400.1	Wheat	cytosol	21.57	21.71
TraesCS3A01G199800.1	Wheat	plasma membrane	20.26	21.68
TraesCS5A01G246300.1	Wheat	cytosol	22.22	21.05
TraesCS4A01G110200.1	Wheat	plastid	21.9	20.68
TraesCS5A01G300800.1	Wheat	cytosol	21.9	20.68
TraesCS2A01G317100.1	Wheat	cytosol, mitochondrion, plastid	19.28	18.38
TraesCS3A01G135800.1	Wheat	cytosol	17.97	17.97
TraesCS1A01G124600.1	Wheat	golgi, unclear	17.65	17.88
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	13.07	13.2

Protein Annotations

EnsemblPlants:TraesCS4A01G407600.1	EnsemblPlantsGene:TraesCS4A01G407600	Gene3D:1.50.40.10	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF388	PFAM:PF00153	PFscan:PS50920	SEG:seg
SUPFAM:SSF103506	MapMan:4.1.1.3	MapMan:24.2.13	:	:	:

Description

No Description!

Coordinates

chr4A:-:680373308..680376652

Molecular Weight (calculated)

33072.1 Da

IEP (calculated)

9.742

GRAVY (calculated)

0.067

Length

306 amino acids

Sequence
(BLAST)

001: MAGLGDAAKE YIAGSAAGVA QVVVGHPFDT VKVKLQAHNT RAHGKVYKNA FHCTSRILVE EGIRGLYKGA SSSFIGIALE SSLFFGTYAQ AKQLLQGKSE
101: DCKPRLQVII PAAACSGALI SCILAPTELT KCRMQVQGKD VMYATRYSSP LDCAVKTLQR EGVRGIFRGG LATLYREAIG NAVFFCTYEY SRYWMHNYID
201: SRQFSSNSGL VVAKDIGIGI MSGGLSGMAF WTATLPMDVA KTIIQTDHNP QSSRNPFRVL NMVYRRAGLA GCYAGLGPTL ARAFPANAAA IVAWEYSAKI
301: LGIRRD

Best Arabidopsis Sequence Match ( AT2G33820.1 )
(BLAST)

001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D

Arabidopsis Description

ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.