Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G206800.1 | Wheat | cytosol, mitochondrion, plastid | 80.36 | 99.36 |
| TraesCS1D01G195400.1 | Wheat | golgi | 83.2 | 91.48 |
| Os10t0573700-01 | Rice | mitochondrion | 71.58 | 87.66 |
| KRH74426 | Soybean | cytosol, mitochondrion, vacuole | 63.57 | 82.83 |
| GSMUA_Achr5P13930_001 | Banana | cytosol | 63.05 | 82.43 |
| KRH75622 | Soybean | cytosol, mitochondrion, vacuole | 62.27 | 81.14 |
| KRH39532 | Soybean | cytosol, mitochondrion, plastid | 62.27 | 81.14 |
| KRH45454 | Soybean | cytosol, mitochondrion, vacuole | 62.02 | 80.81 |
| GSMUA_Achr5P03430_001 | Banana | cytosol, mitochondrion, plastid | 60.98 | 79.73 |
| Bra022065.1-P | Field mustard | cytosol, mitochondrion, plastid | 61.24 | 79.53 |
| CDX87675 | Canola | cytosol, mitochondrion, plastid | 61.24 | 79.53 |
| CDY37150 | Canola | cytosol, mitochondrion, plastid | 61.24 | 79.0 |
| AT5G46800.2 | Thale cress | cytosol | 60.98 | 78.67 |
| GSMUA_Achr4P16910_001 | Banana | cytosol, mitochondrion, plastid | 60.98 | 78.41 |
| TraesCS1A01G191900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 59.95 | 78.38 |
| Bra017524.1-P | Field mustard | cytosol, mitochondrion, plastid | 60.72 | 78.33 |
| CDY35182 | Canola | cytosol, mitochondrion, plastid | 60.72 | 78.33 |
| CDY03190 | Canola | cytosol, mitochondrion, plastid | 60.47 | 78.0 |
| Solyc10g079200.1.1 | Tomato | plastid | 59.69 | 77.78 |
| PGSC0003DMT400021041 | Potato | cytosol, mitochondrion, plastid | 59.43 | 77.44 |
| CDY58507 | Canola | cytosol, mitochondrion, plastid | 59.69 | 77.0 |
| PGSC0003DMT400005377 | Potato | cytosol | 58.14 | 76.79 |
| Bra024994.1-P | Field mustard | cytosol, mitochondrion, plastid | 59.43 | 76.67 |
| CDX77693 | Canola | cytosol, mitochondrion, plastid | 59.43 | 76.67 |
| Solyc06g061170.2.1 | Tomato | plastid | 44.7 | 75.55 |
| VIT_02s0012g01250.t01 | Wine grape | mitochondrion, plastid | 66.67 | 75.44 |
| PGSC0003DMT400019719 | Potato | cytosol | 14.73 | 66.28 |
| HORVU1Hr1G050130.3 | Barley | vacuole | 44.44 | 53.25 |
| TraesCS4A01G407600.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 26.36 | 33.33 |
| TraesCS3A01G149900.1 | Wheat | cytosol | 27.13 | 32.41 |
| TraesCS3A01G199800.1 | Wheat | plasma membrane | 19.64 | 26.57 |
| TraesCS4A01G179400.1 | Wheat | cytosol | 19.38 | 24.67 |
| TraesCS5A01G246300.1 | Wheat | cytosol | 19.9 | 23.84 |
| TraesCS4A01G110200.1 | Wheat | plastid | 18.86 | 22.53 |
| TraesCS5A01G300800.1 | Wheat | cytosol | 18.6 | 22.22 |
| TraesCS1A01G124600.1 | Wheat | golgi, unclear | 17.31 | 22.19 |
| TraesCS3A01G135800.1 | Wheat | cytosol | 17.05 | 21.57 |
| TraesCS2A01G317100.1 | Wheat | cytosol, mitochondrion, plastid | 17.83 | 21.5 |
| TraesCS5A01G096600.1 | Wheat | mitochondrion, plastid | 12.66 | 16.17 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G191800.1 | EnsemblPlantsGene:TraesCS1A01G191800 | Gene3D:1.50.40.10 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mitochondrial_sb/sol_carrier |
| InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF640 | PFAM:PF00153 | PFscan:PS50920 | SEG:seg |
| SUPFAM:SSF103506 | MapMan:24.2.13 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:347320199..347322090
Molecular Weight (calculated)
39725.4 Da
IEP (calculated)
10.282
GRAVY (calculated)
0.290
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MWVRLCGFVW LQRLVRGWVG GSGLAWHLNH LTLLPGLYFC RWLSGVFSPH LCSGWKGGLS PAPFRLGVKM GDVAKDLAAG TVGGAAQLVV GHPFDTIKVK
101: LQSQPTPPPG QPPKFAGAMD AVKQTISAEG PRGLYKGMGA PLATVAAFNA VLFTVRGQME ALLRSEPGAA LTVGQQVVAG AGAGVAVSFL ACPTELIKCR
201: LQAQSALATA APAAAAAAAA PAAGGAAATV TTTASAAAVK YGGPLDVARH VLRSEGGVRG LFKGLVPTMA REIPGNALMF GVYEATKQFI AGGQDTSELG
301: RGSLILAGGV AGAAFWGSVY PTDVVKSKLQ VDDFKNPKYS GSMDAFKKIL AADGARGLYR GFGPAMARSV PANGACFLAY EVTRSLL
101: LQSQPTPPPG QPPKFAGAMD AVKQTISAEG PRGLYKGMGA PLATVAAFNA VLFTVRGQME ALLRSEPGAA LTVGQQVVAG AGAGVAVSFL ACPTELIKCR
201: LQAQSALATA APAAAAAAAA PAAGGAAATV TTTASAAAVK YGGPLDVARH VLRSEGGVRG LFKGLVPTMA REIPGNALMF GVYEATKQFI AGGQDTSELG
301: RGSLILAGGV AGAAFWGSVY PTDVVKSKLQ VDDFKNPKYS GSMDAFKKIL AADGARGLYR GFGPAMARSV PANGACFLAY EVTRSLL
001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG
Arabidopsis Description
BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.