Factsheet for PGSC0003DMT400019719

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	79.07	22.9
PGSC0003DMT400005377	Potato	cytosol	73.26	21.5
Os10t0573800-01	Rice	cytosol	73.26	21.28
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	72.09	20.95
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	72.09	20.81
CDX87675	Canola	cytosol, mitochondrion, plastid	72.09	20.81
AT5G46800.2	Thale cress	cytosol	72.09	20.67
CDY37150	Canola	cytosol, mitochondrion, plastid	72.09	20.67
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	70.93	20.61
EER91889	Sorghum	cytosol	70.93	20.61
TraesCS1D01G195500.1	Wheat	golgi	69.77	20.27
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	69.77	20.27
Os10t0573700-01	Rice	mitochondrion	74.42	20.25
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	69.77	20.0
CDY03190	Canola	cytosol, mitochondrion, plastid	69.77	20.0
CDY35182	Canola	cytosol, mitochondrion, plastid	69.77	20.0
GSMUA_Achr5P13930_001	Banana	cytosol	67.44	19.59
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	67.44	19.33
CDX77693	Canola	cytosol, mitochondrion, plastid	67.44	19.33
CDY58507	Canola	cytosol, mitochondrion, plastid	67.44	19.33
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	63.95	18.27
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	66.28	18.21
HORVU1Hr1G050130.3	Barley	vacuole	67.44	17.96
TraesCS1D01G195400.1	Wheat	golgi	66.28	16.19
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	66.28	14.73
PGSC0003DMT400042642	Potato	cytosol	38.37	10.48
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	36.05	10.47
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	34.88	9.84
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	34.88	9.17
PGSC0003DMT400037834	Potato	cytosol	24.42	6.62
PGSC0003DMT400047378	Potato	cytosol	22.09	6.57
PGSC0003DMT400052443	Potato	vacuole	24.42	6.42
PGSC0003DMT400041633	Potato	cytosol	23.26	6.17
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	24.42	6.07
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	17.44	5.05
PGSC0003DMT400043390	Potato	cytosol, plastid	19.77	4.08

Protein Annotations

EnsemblPlants:PGSC0003DMT400019719	EnsemblPlantsGene:PGSC0003DMG400007617	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF640
PFAM:PF00153	PFscan:PS50920	PGSC:PGSC0003DMG400007617	SUPFAM:SSF103506	UniParc:UPI000295664A	UniProt:M1ACH1
MapMan:24.2.13	:	:	:	:	:

Description

Mitochondrial carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007617]

Coordinates

chr4:+:11331110..11332797

Molecular Weight (calculated)

9113.1 Da

IEP (calculated)

9.907

GRAVY (calculated)

0.217

Length

86 amino acids

Sequence
(BLAST)

1: MPITGGLAGG KFWLSVYPTD VIKSVIQVDD YKNPKFSGFA DAFKKIVASE GVKGLHKGFG SAMARSVPAN VACLLAYEMI TRSSLG

Best Arabidopsis Sequence Match ( AT5G46800.1 )
(BLAST)

001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG

Arabidopsis Description

BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.