Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024994.1-P | Field mustard | cytosol, mitochondrion, plastid | 99.67 | 99.67 |
| CDX77693 | Canola | cytosol, mitochondrion, plastid | 99.0 | 99.0 |
| CDX87675 | Canola | cytosol, mitochondrion, plastid | 92.67 | 93.29 |
| CDY37150 | Canola | cytosol, mitochondrion, plastid | 92.67 | 92.67 |
| CDY35182 | Canola | cytosol, mitochondrion, plastid | 92.0 | 92.0 |
| CDY03190 | Canola | cytosol, mitochondrion, plastid | 91.67 | 91.67 |
| AT5G46800.2 | Thale cress | cytosol | 91.33 | 91.33 |
| KRH74426 | Soybean | cytosol, mitochondrion, vacuole | 77.33 | 78.11 |
| KRH45454 | Soybean | cytosol, mitochondrion, vacuole | 76.67 | 77.44 |
| KRH75622 | Soybean | cytosol, mitochondrion, vacuole | 76.33 | 77.1 |
| KRH39532 | Soybean | cytosol, mitochondrion, plastid | 76.33 | 77.1 |
| GSMUA_Achr5P13930_001 | Banana | cytosol | 76.0 | 77.03 |
| Solyc10g079200.1.1 | Tomato | plastid | 75.33 | 76.09 |
| GSMUA_Achr5P03430_001 | Banana | cytosol, mitochondrion, plastid | 74.0 | 75.0 |
| Os10t0573700-01 | Rice | mitochondrion | 78.33 | 74.37 |
| TraesCS1B01G206800.1 | Wheat | cytosol, mitochondrion, plastid | 77.0 | 73.8 |
| Solyc06g061170.2.1 | Tomato | plastid | 55.67 | 72.93 |
| Os10t0573800-01 | Rice | cytosol | 71.67 | 72.64 |
| TraesCS1D01G195500.1 | Wheat | golgi | 71.67 | 72.64 |
| GSMUA_Achr4P16910_001 | Banana | cytosol, mitochondrion, plastid | 72.67 | 72.43 |
| TraesCS1A01G191900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 71.33 | 72.3 |
| TraesCS1B01G206900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 71.33 | 72.3 |
| EER91889 | Sorghum | cytosol | 71.0 | 71.96 |
| VIT_02s0012g01250.t01 | Wine grape | mitochondrion, plastid | 78.67 | 69.01 |
| PGSC0003DMT400019719 | Potato | cytosol | 19.33 | 67.44 |
| TraesCS1D01G195400.1 | Wheat | golgi | 77.0 | 65.62 |
| TraesCS1A01G191800.1 | Wheat | endoplasmic reticulum, mitochondrion | 77.0 | 59.69 |
| HORVU1Hr1G050130.3 | Barley | vacuole | 48.0 | 44.58 |
| CDX87281 | Canola | cytosol, mitochondrion, plastid | 34.0 | 32.69 |
| CDY58780 | Canola | cytosol, mitochondrion, plastid | 34.0 | 32.69 |
| CDY37683 | Canola | cytosol, peroxisome, plastid | 32.67 | 32.24 |
| CDY57210 | Canola | cytosol, peroxisome, plastid | 32.33 | 31.91 |
| CDX67588 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.67 | 27.3 |
| CDY51585 | Canola | plasma membrane | 27.67 | 27.3 |
| CDX73508 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.67 | 27.21 |
| CDX78208 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.67 | 27.21 |
| CDY13183 | Canola | plasma membrane | 25.0 | 26.69 |
| CDX76170 | Canola | cytosol, peroxisome, plastid | 26.33 | 25.9 |
| CDY02849 | Canola | plasma membrane | 26.0 | 25.83 |
| CDY32672 | Canola | plasma membrane | 26.0 | 25.83 |
| CDX80317 | Canola | endoplasmic reticulum, plasma membrane | 25.67 | 25.25 |
| CDY33772 | Canola | mitochondrion | 25.33 | 24.68 |
| CDY22103 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 24.0 | 22.93 |
| CDX91241 | Canola | cytosol | 22.0 | 22.76 |
| CDX97871 | Canola | cytosol | 8.33 | 22.73 |
| CDX97299 | Canola | extracellular | 18.67 | 22.49 |
| CDY21942 | Canola | plastid | 23.33 | 22.22 |
| CDX88877 | Canola | cytosol | 22.0 | 22.07 |
| CDY11206 | Canola | cytosol | 24.67 | 21.89 |
| CDY42293 | Canola | cytosol | 21.67 | 21.74 |
| CDX92503 | Canola | cytosol | 21.67 | 21.74 |
| CDY35862 | Canola | cytosol | 21.67 | 21.74 |
| CDY44940 | Canola | cytosol | 21.67 | 21.74 |
| CDY55007 | Canola | cytosol, peroxisome, plasma membrane | 26.0 | 21.37 |
| CDY34292 | Canola | cytosol, plasma membrane, plastid | 22.33 | 21.27 |
| CDY03439 | Canola | cytosol, plasma membrane, plastid | 22.33 | 21.27 |
| CDX91242 | Canola | extracellular | 1.33 | 21.05 |
| CDY13754 | Canola | cytosol | 21.67 | 20.63 |
| CDY67400 | Canola | plasma membrane | 23.0 | 20.6 |
| CDX81127 | Canola | plasma membrane | 23.0 | 20.6 |
| CDX89481 | Canola | cytosol | 21.67 | 20.5 |
| CDY25603 | Canola | cytosol | 21.67 | 20.5 |
| CDX76916 | Canola | cytosol | 21.33 | 20.32 |
| CDX70888 | Canola | cytosol, extracellular, plastid | 16.0 | 18.82 |
| CDX80777 | Canola | cytosol | 25.33 | 18.72 |
| CDY27701 | Canola | cytosol | 20.0 | 17.65 |
Protein Annotations
| EnsemblPlants:CDY58507 | EnsemblPlantsGene:GSBRNA2T00023688001 | Gene3D:1.50.40.10 | GO:A0A078J6B9 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
| PANTHER:PTHR24089:SF640 | PFAM:PF00153 | PFscan:PS50920 | ProteinID:CDY58507 | ProteinID:CDY58507.1 | SEG:seg |
| SUPFAM:SSF103506 | UniParc:UPI0004EEC6CE | UniProt:A0A078J6B9 | MapMan:24.2.13 | : | : |
Description
BnaA06g40370DBnaA06g40370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6B9]
Coordinates
chrLK033674:-:42064..43847
Molecular Weight (calculated)
31081.7 Da
IEP (calculated)
9.984
GRAVY (calculated)
0.165
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAAKDLAS GTVGGAAQII VGHPFDTIKV KLQSQPAPTP GQPPRYTGAF DAVRQTVAAE GPKGLYKGMG APLATVAALN AVLFTVRGQM EGLLRSDLGV
101: PLTISQQFVC GSGAGFAVSF LACPTELVKC RLQAQGALAC ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREIPGNAT MFATYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPADVVKSV LQVDDYKNPK YRGSMDAFRK ILKAEGVKGL YKGFGPAMGR SVFANAACFL AYEKTRSSLG
101: PLTISQQFVC GSGAGFAVSF LACPTELVKC RLQAQGALAC ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREIPGNAT MFATYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPADVVKSV LQVDDYKNPK YRGSMDAFRK ILKAEGVKGL YKGFGPAMGR SVFANAACFL AYEKTRSSLG
001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG
Arabidopsis Description
BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.