CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	52.73	39.46
CDX76916	Canola	cytosol	80.91	28.25
CDX89481	Canola	cytosol	80.0	27.76
CDY13754	Canola	cytosol	79.09	27.62
CDY25603	Canola	cytosol	79.09	27.44
CDY27701	Canola	cytosol	80.0	25.88
AT2G22500.1	Thale cress	cytosol	71.82	25.24
GSMUA_Achr3P06760_001	Banana	cytosol	60.0	24.35
GSMUA_Achr5P17950_001	Banana	cytosol	60.91	24.28
TraesCS5D01G307000.1	Wheat	cytosol	62.73	21.43
TraesCS5A01G300800.1	Wheat	cytosol	62.73	21.3
CDY03439	Canola	cytosol, plasma membrane, plastid	60.91	21.27
HORVU5Hr1G078950.1	Barley	cytosol	62.73	21.23
TraesCS5B01G300300.2	Wheat	cytosol	62.73	21.23
CDY34292	Canola	cytosol, plasma membrane, plastid	60.0	20.95
TraesCS5D01G252800.1	Wheat	cytosol	60.91	20.74
TraesCS5A01G246300.1	Wheat	cytosol	60.0	20.43
TraesCS5B01G243600.1	Wheat	cytosol	60.0	20.43
EES15143	Sorghum	cytosol	60.91	20.36
Zm00001d031833_P001	Maize	mitochondrion	60.0	20.25
CDX81127	Canola	plasma membrane	60.91	20.0
CDY67400	Canola	plasma membrane	60.91	20.0
HORVU5Hr1G069700.1	Barley	plastid	60.0	16.26
Os09t0465400-00	Rice	plastid	58.18	16.04
CDX97299	Canola	extracellular	30.0	13.25
CDY13183	Canola	plasma membrane	33.64	13.17
CDY32672	Canola	plasma membrane	34.55	12.58
CDY02849	Canola	plasma membrane	34.55	12.58
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.55	12.5
CDY51585	Canola	plasma membrane	34.55	12.5
CDY33772	Canola	mitochondrion	34.55	12.34
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.64	12.13
CDX76170	Canola	cytosol, peroxisome, plastid	33.64	12.13
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.64	12.13
CDX80317	Canola	endoplasmic reticulum, plasma membrane	32.73	11.8
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	33.64	11.78
CDY21942	Canola	plastid	33.64	11.75
CDX92503	Canola	cytosol	30.91	11.37
CDX88877	Canola	cytosol	30.91	11.37
CDY44940	Canola	cytosol	30.91	11.37
CDY42293	Canola	cytosol	30.91	11.37
CDY35862	Canola	cytosol	30.91	11.37
CDX70888	Canola	cytosol, extracellular, plastid	24.55	10.59
CDX91242	Canola	extracellular	1.82	10.53
CDY55007	Canola	cytosol, peroxisome, plasma membrane	33.64	10.14
CDX91241	Canola	cytosol	26.36	10.0
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	5.45	9.68
CDY37683	Canola	cytosol, peroxisome, plastid	24.55	8.88
CDY57210	Canola	cytosol, peroxisome, plastid	23.64	8.55
CDY58507	Canola	cytosol, mitochondrion, plastid	22.73	8.33
CDX77693	Canola	cytosol, mitochondrion, plastid	22.73	8.33
CDY03190	Canola	cytosol, mitochondrion, plastid	21.82	8.0
CDY35182	Canola	cytosol, mitochondrion, plastid	21.82	8.0
CDX87675	Canola	cytosol, mitochondrion, plastid	20.91	7.72
CDY11206	Canola	cytosol	23.64	7.69
CDY37150	Canola	cytosol, mitochondrion, plastid	20.91	7.67
CDX87281	Canola	cytosol, mitochondrion, plastid	19.09	6.73
CDY58780	Canola	cytosol, mitochondrion, plastid	19.09	6.73
CDX80777	Canola	cytosol	22.73	6.16

Protein Annotations

EnsemblPlants:CDX97871	EnsemblPlantsGene:GSBRNA2T00105205001	Gene3D:1.50.40.10	GO:A0A078E9H4	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX97871	ProteinID:CDX97871.1	SUPFAM:SSF103506	UniParc:UPI0004EDF365	MapMan:24.2.13	:

Description

BnaC04g40680D

Coordinates

chrLK031901:-:1149557..1149952

Molecular Weight (calculated)

12436.4 Da

IEP (calculated)

11.784

GRAVY (calculated)

-0.195

Length

110 amino acids

Sequence
(BLAST)

001: MNPADVAMVR MQADGRLLVV DRRNYKSVLD AIAQMVRGEG ITLLWRGSSM TINRAMLVTA SQLATYDSVK EMILEKGLMR DGFGTHVTSS FAAGWRRGKR
101: HRIRERLIAR

Best Arabidopsis Sequence Match ( AT2G22500.1 )
(BLAST)

001: MGLKGFAEGG IASIVAGCST HPLDLIKVRM QLQGESAPIQ TNLRPALAFQ TSTTVNAPPL RVGVIGVGSR LIREEGMRAL FSGVSATVLR QTLYSTTRMG
101: LYDIIKGEWT DPETKTMPLM KKIGAGAIAG AIGAAVGNPA DVAMVRMQAD GRLPLTDRRN YKSVLDAITQ MIRGEGVTSL WRGSSLTINR AMLVTSSQLA
201: SYDSVKETIL EKGLLKDGLG THVSASFAAG FVASVASNPV DVIKTRVMNM KVVAGVAPPY KGAVDCALKT VKAEGIMSLY KGFIPTVSRQ APFTVVLFVT
301: LEQVKKLFKD YDF

Arabidopsis Description

PUMP5Mitochondrial uncoupling protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.