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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014840.1-P Field mustard cytosol, peroxisome, plastid 99.29 91.48
CDX76170 Canola cytosol, peroxisome, plastid 99.29 91.48
CDX67588 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 93.59 86.51
CDX73508 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 93.59 86.23
CDX78208 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 93.59 86.23
CDY51585 Canola plasma membrane 93.24 86.18
AT3G54110.1 Thale cress cytosol, plasma membrane 92.53 84.97
Solyc09g011920.2.1 Tomato plastid 83.27 76.47
GSMUA_Achr9P03550_001 Banana cytosol 80.07 74.26
GSMUA_Achr6P33850_001 Banana cytosol 79.36 73.6
PGSC0003DMT400052443 Potato vacuole 80.43 69.11
CDX80317 Canola endoplasmic reticulum, plasma membrane 70.11 64.59
CDY02849 Canola plasma membrane 69.04 64.24
CDY32672 Canola plasma membrane 68.33 63.58
CDY55007 Canola cytosol, peroxisome, plasma membrane 70.11 53.97
CDX97871 Canola cytosol 13.17 33.64
CDY03439 Canola cytosol, plasma membrane, plastid 37.37 33.33
CDY34292 Canola cytosol, plasma membrane, plastid 37.01 33.02
CDX76916 Canola cytosol 36.65 32.7
CDY13754 Canola cytosol 36.65 32.7
CDY25603 Canola cytosol 36.3 32.18
CDX89481 Canola cytosol 36.3 32.18
CDY33772 Canola mitochondrion 33.45 30.52
CDX81127 Canola plasma membrane 35.59 29.85
CDY67400 Canola plasma membrane 35.59 29.85
CDX97299 Canola extracellular 25.62 28.92
CDX91241 Canola cytosol 29.54 28.62
CDX88877 Canola cytosol 30.25 28.43
CDX92503 Canola cytosol 29.89 28.09
CDY35862 Canola cytosol 29.89 28.09
CDY42293 Canola cytosol 29.89 28.09
CDY44940 Canola cytosol 29.89 28.09
CDY22103 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 30.96 27.71
CDY21942 Canola plastid 30.61 27.3
CDY27701 Canola cytosol 32.03 26.47
CDX77693 Canola cytosol, mitochondrion, plastid 26.69 25.0
CDY58507 Canola cytosol, mitochondrion, plastid 26.69 25.0
CDX87675 Canola cytosol, mitochondrion, plastid 25.62 24.16
CDY03190 Canola cytosol, mitochondrion, plastid 25.62 24.0
CDY37150 Canola cytosol, mitochondrion, plastid 25.62 24.0
CDX70888 Canola cytosol, extracellular, plastid 21.71 23.92
CDY35182 Canola cytosol, mitochondrion, plastid 25.27 23.67
CDY11206 Canola cytosol 23.84 19.82
CDY58780 Canola cytosol, mitochondrion, plastid 21.71 19.55
CDX87281 Canola cytosol, mitochondrion, plastid 21.71 19.55
CDY37683 Canola cytosol, peroxisome, plastid 19.93 18.42
CDY57210 Canola cytosol, peroxisome, plastid 19.93 18.42
CDX80777 Canola cytosol 23.49 16.26
CDX91242 Canola extracellular 1.07 15.79
Protein Annotations
EnsemblPlants:CDY13183EnsemblPlantsGene:GSBRNA2T00071054001Gene3D:1.50.40.10GO:A0A078FLP9GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR018108InterPro:IPR023395InterPro:Mitochondrial_sb/sol_carrierInterPro:Mt_carrier_dom_sfPANTHER:PTHR24089
PANTHER:PTHR24089:SF622PFAM:PF00153PFscan:PS50920ProteinID:CDY13183ProteinID:CDY13183.1SUPFAM:SSF103506
UniParc:UPI0004EDDCD6UniProt:A0A078FLP9MapMan:2.4.2.3MapMan:24.2.13::
Description
BnaC04g26520DBnaC04g26520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLP9]
Coordinates
chrLK032032:+:244715..247173
Molecular Weight (calculated)
30264.2 Da
IEP (calculated)
9.656
GRAVY (calculated)
0.138
Length
281 amino acids
Sequence
(BLAST)
001: MVAADSKPDL TLPKTFACSA FAACVGEVCT IPLDTAKVRL QLQKEEGLRS LWKGIVPGLH RQCLCGGLRI GMYEPVKNLY VGKDHVGDVP LSKKILAGLT
101: TGALGIIVAN PTDLVKVRLQ AEGKLAAGVP KRYTGALNAY STIVRQEGVR ALWTGLGPNV ARNAIINAAE LASYDQVKQT ILKIPGFTDN VVTHILSGLG
201: AGFFAVCIGS PVDVVKSRMM GDSAYKNTID CFVQTLQSDG PMAFYKGFIP NFGRLGSWNV IMFLTLEQAK KYVRELESSK K
Best Arabidopsis Sequence Match ( AT1G14140.1 )
(BLAST)
001: MERSRVTREA PTGTRILLAS LSAMVAESVT FPIDLTKTRM QLHGSGSASG AHRIGAFGVV SEIARKEGVI GLYKGLSPAI IRHLFYTPIR IIGYENLKGL
101: IVRSETNNSE SLPLATKALV GGFSGVIAQV VASPADLVKV RMQADGRLVS QGLKPRYSGP IEAFTKILQS EGVKGLWKGV LPNIQRAFLV NMGELACYDH
201: AKHFVIDKKI AEDNIFAHTL ASIMSGLAST SLSCPADVVK TRMMNQGENA VYRNSYDCLV KTVKFEGIRA LWKGFFPTWA RLGPWQFVFW VSYEKFRLLA
301: GISSF
Arabidopsis Description
PUMP3Mitochondrial uncoupling protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI74]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.