Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra021881.1-P | Field mustard | cytosol, peroxisome, plastid | 98.68 | 98.68 |
CDY57210 | Canola | cytosol, peroxisome, plastid | 98.03 | 98.03 |
AT2G33820.3 | Thale cress | cytosol, mitochondrion, plastid | 93.75 | 89.34 |
PGSC0003DMT400058719 | Potato | cytosol, mitochondrion, nucleus | 69.41 | 69.18 |
Solyc10g009090.2.1 | Tomato | extracellular | 69.08 | 68.85 |
VIT_10s0003g00060.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion | 68.09 | 68.32 |
KRH20413 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 60.86 | 67.27 |
KRH50090 | Soybean | cytosol | 66.78 | 66.56 |
PGSC0003DMT400076450 | Potato | cytosol, endoplasmic reticulum, mitochondrion | 67.11 | 62.39 |
GSMUA_Achr4P33320_001 | Banana | cytosol, mitochondrion, nucleus | 61.51 | 61.11 |
KRH65469 | Soybean | extracellular | 25.0 | 60.32 |
Zm00001d032430_P002 | Maize | mitochondrion | 60.53 | 60.13 |
KXG38173 | Sorghum | cytosol, extracellular, mitochondrion | 60.2 | 59.8 |
TraesCS4A01G407600.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 59.21 | 58.82 |
TraesCS4D01G305200.1 | Wheat | cytosol | 58.88 | 58.5 |
KRH62946 | Soybean | extracellular | 20.72 | 58.33 |
TraesCS4B01G307000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 58.55 | 58.17 |
HORVU4Hr1G078670.2 | Barley | cytosol, mitochondrion, plasma membrane | 57.89 | 57.52 |
Os11t0423800-01 | Rice | nucleus | 26.64 | 56.64 |
Solyc02g077910.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 53.62 | 54.33 |
CDX87675 | Canola | cytosol, mitochondrion, plastid | 32.24 | 32.89 |
CDY58507 | Canola | cytosol, mitochondrion, plastid | 32.24 | 32.67 |
CDY37150 | Canola | cytosol, mitochondrion, plastid | 32.24 | 32.67 |
CDY03190 | Canola | cytosol, mitochondrion, plastid | 31.91 | 32.33 |
CDX77693 | Canola | cytosol, mitochondrion, plastid | 31.91 | 32.33 |
CDY35182 | Canola | cytosol, mitochondrion, plastid | 31.91 | 32.33 |
CDX87281 | Canola | cytosol, mitochondrion, plastid | 25.66 | 25.0 |
CDY58780 | Canola | cytosol, mitochondrion, plastid | 25.33 | 24.68 |
CDX97871 | Canola | cytosol | 8.88 | 24.55 |
CDY34292 | Canola | cytosol, plasma membrane, plastid | 23.68 | 22.86 |
CDX89481 | Canola | cytosol | 23.68 | 22.71 |
CDY25603 | Canola | cytosol | 23.68 | 22.71 |
CDY03439 | Canola | cytosol, plasma membrane, plastid | 23.36 | 22.54 |
CDX76916 | Canola | cytosol | 23.03 | 22.22 |
CDY13754 | Canola | cytosol | 23.03 | 22.22 |
CDX80317 | Canola | endoplasmic reticulum, plasma membrane | 22.04 | 21.97 |
CDY32672 | Canola | plasma membrane | 21.71 | 21.85 |
CDY02849 | Canola | plasma membrane | 21.71 | 21.85 |
CDX91242 | Canola | extracellular | 1.32 | 21.05 |
CDX81127 | Canola | plasma membrane | 22.7 | 20.6 |
CDY67400 | Canola | plasma membrane | 22.7 | 20.6 |
CDX78208 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 20.39 | 20.33 |
CDX73508 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 20.39 | 20.33 |
CDY33772 | Canola | mitochondrion | 20.39 | 20.13 |
CDX67588 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 20.07 | 20.07 |
CDY51585 | Canola | plasma membrane | 20.07 | 20.07 |
CDY13183 | Canola | plasma membrane | 18.42 | 19.93 |
CDY27701 | Canola | cytosol | 22.04 | 19.71 |
CDY11206 | Canola | cytosol | 21.71 | 19.53 |
CDX76170 | Canola | cytosol, peroxisome, plastid | 19.41 | 19.34 |
CDY55007 | Canola | cytosol, peroxisome, plasma membrane | 22.7 | 18.9 |
CDX70888 | Canola | cytosol, extracellular, plastid | 15.79 | 18.82 |
CDX88877 | Canola | cytosol | 18.42 | 18.73 |
CDY35862 | Canola | cytosol | 18.09 | 18.39 |
CDY42293 | Canola | cytosol | 18.09 | 18.39 |
CDX92503 | Canola | cytosol | 18.09 | 18.39 |
CDY44940 | Canola | cytosol | 18.09 | 18.39 |
CDX97299 | Canola | extracellular | 14.47 | 17.67 |
CDY22103 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 17.11 | 16.56 |
CDX91241 | Canola | cytosol | 15.79 | 16.55 |
CDY21942 | Canola | plastid | 17.11 | 16.51 |
CDX80777 | Canola | cytosol | 21.71 | 16.26 |
Protein Annotations
EnsemblPlants:CDY37683 | EnsemblPlantsGene:GSBRNA2T00064575001 | Gene3D:1.50.40.10 | GO:A0A078HLE5 | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 |
PANTHER:PTHR24089:SF388 | PFAM:PF00153 | PFscan:PS50920 | ProteinID:CDY37683 | ProteinID:CDY37683.1 | SEG:seg |
SUPFAM:SSF103506 | UniParc:UPI0004EE1611 | UniProt:A0A078HLE5 | MapMan:4.1.1.3 | MapMan:24.2.13 | : |
Description
BnaA04g19850DBnaA04g19850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLE5]
Coordinates
chrLK032406:+:70475..72143
Molecular Weight (calculated)
32771.0 Da
IEP (calculated)
9.315
GRAVY (calculated)
0.121
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGLGFYKE YVAGMNAGLA TVAVGHPFDT VKVKLQKHNT DVEGLRYKNG LHCASRILQT EGVKGLYRGA TSSFLGMAFE SSLMFGIYSQ AKLFLRGSLP
101: DDGPRPEIIV PSAMFGGAII SFVLCPTELV KCRMQIQGTD SLVPNFRRYT SPLDCAVQTV KNEGVTGIFR GGSATLLREC AGNAVFFTVY EYLRYHIHSR
201: LEGSKLKDGY LVDMGIGVLT GGLGGIACWS AVLPFDVAKT VIQTSPDNAT ETNPFKVLRS IHKRAGVKGC YAGLGPTIVR AFPANAAAIV AWELSMKLLG
301: IKRD
101: DDGPRPEIIV PSAMFGGAII SFVLCPTELV KCRMQIQGTD SLVPNFRRYT SPLDCAVQTV KNEGVTGIFR GGSATLLREC AGNAVFFTVY EYLRYHIHSR
201: LEGSKLKDGY LVDMGIGVLT GGLGGIACWS AVLPFDVAKT VIQTSPDNAT ETNPFKVLRS IHKRAGVKGC YAGLGPTIVR AFPANAAAIV AWELSMKLLG
301: IKRD
001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D
Arabidopsis Description
ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.