Factsheet for Solyc10g009090.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	97.05	97.05
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	75.41	75.91
KRH50090	Soybean	cytosol	71.15	71.15
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	63.93	70.91
CDY57210	Canola	cytosol, peroxisome, plastid	69.18	69.41
Solyc02g077910.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	68.2	69.33
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	68.85	69.08
CDY37683	Canola	cytosol, peroxisome, plastid	68.85	69.08
KRH65469	Soybean	extracellular	27.87	67.46
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	66.23	66.01
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	68.85	65.83
KRH62946	Soybean	extracellular	22.62	63.89
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	60.98	60.78
TraesCS4A01G407600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	60.98	60.78
Zm00001d032430_P002	Maize	mitochondrion	60.66	60.46
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	60.66	60.46
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	60.66	60.46
TraesCS4D01G305200.1	Wheat	cytosol	60.33	60.13
Os11t0423800-01	Rice	nucleus	27.87	59.44
Solyc10g079200.1.1	Tomato	plastid	34.1	35.02
Solyc06g061170.2.1	Tomato	plastid	26.23	34.93
Solyc06g066680.2.1	Tomato	cytosol	29.18	28.25
Solyc03g120100.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion	25.9	26.33
Solyc09g031680.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	20.98	21.69
Solyc09g011920.2.1	Tomato	plastid	20.98	20.91
Solyc09g074370.2.1	Tomato	cytosol	18.69	20.0
Solyc05g051400.2.1	Tomato	plastid	19.67	19.93
Solyc05g007730.2.1	Tomato	cytosol	20.66	19.69
Solyc11g010500.1.1	Tomato	cytosol	20.33	19.14
Solyc01g005620.2.1	Tomato	plastid	16.39	16.84
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	5.57	14.53

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	MapMan:4.1.1.3	GO:GO:0000064	GO:GO:0000066	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:1903352	InterPro:IPR018108	InterPro:IPR023395	UniProt:K4CY85	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF388	SUPFAM:SSF103506	EnsemblPlantsGene:Solyc10g009090.2
EnsemblPlants:Solyc10g009090.2.1	TMHMM:TMhelix	UniParc:UPI000276BBB0	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:-:3110650..3114040

Molecular Weight (calculated)

32620.9 Da

IEP (calculated)

10.060

GRAVY (calculated)

0.113

Length

305 amino acids

Sequence
(BLAST)

001: MSGNSGYKEY VAGLMAGIAI VITGHPFDTV KVKLQKHNTE ARGIKYKNGL HCAARILKTE GVKGLYRGAT SSFIGMAFES SLVFGIYSQT KILLQGGPDG
101: GKPQPQAIVP SAAFGGAIIS FILCPSELVK CRMQVQGADS VLPSSSRYGG PLECALKTVK CEGITGIFRG GFTTLLRESF GNAVFFSTYE YVRYHLHLQR
201: KGASSESSQL IDIGVGIMSG GLGGIACWSA VLPLDVAKTI IQTTPEKNHT RNPFRVLKSI YARSGLRGCY MGLGPTIVRA FPANAAAIVT WELSAKLLGI
301: KRDFN

Best Arabidopsis Sequence Match ( AT2G33820.1 )
(BLAST)

001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D

Arabidopsis Description

ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.