Factsheet for Solyc02g077910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
endoplasmic reticulum 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076450	Potato	cytosol, endoplasmic reticulum, mitochondrion	77.33	70.95
Solyc10g009090.2.1	Tomato	extracellular	69.33	68.2
KRH62946	Soybean	extracellular	21.67	60.19
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	60.67	60.07
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	54.0	58.91
KRH50090	Soybean	cytosol	57.0	56.07
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	56.67	55.56
CDY57210	Canola	cytosol, peroxisome, plastid	54.67	53.95
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	54.33	53.62
CDY37683	Canola	cytosol, peroxisome, plastid	54.33	53.62
KRH65469	Soybean	extracellular	22.33	53.17
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	55.67	52.35
Os11t0423800-01	Rice	nucleus	24.33	51.05
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	52.0	50.98
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	51.67	50.65
TraesCS4D01G305200.1	Wheat	cytosol	51.67	50.65
TraesCS4A01G407600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	51.67	50.65
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	51.33	50.33
Zm00001d032430_P002	Maize	mitochondrion	51.0	50.0
Solyc10g079200.1.1	Tomato	plastid	30.33	30.64
Solyc06g061170.2.1	Tomato	plastid	20.0	26.2
Solyc03g120100.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion	23.67	23.67
Solyc06g066680.2.1	Tomato	cytosol	24.33	23.17
Solyc09g031680.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	18.0	18.31
Solyc09g074370.2.1	Tomato	cytosol	17.0	17.89
Solyc05g007730.2.1	Tomato	cytosol	18.67	17.5
Solyc09g011920.2.1	Tomato	plastid	17.0	16.67
Solyc01g005620.2.1	Tomato	plastid	14.33	14.48
Solyc11g010500.1.1	Tomato	cytosol	15.33	14.2
Solyc05g051400.2.1	Tomato	plastid	14.0	13.95
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	4.67	11.97

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	ProteinID:ABH07903.1	GO:GO:0000064	GO:GO:0000066	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:1903352	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF388	UniProt:Q0PY36	SUPFAM:SSF103506	EnsemblPlantsGene:Solyc02g077910.2
EnsemblPlants:Solyc02g077910.2.1	TMHMM:TMhelix	UniParc:UPI0000DBE2B7	SEG:seg	:	:

Description

Mitochondrial amino acid carrier [Source:UniProtKB/TrEMBL;Acc:Q0PY36]

Coordinates

chr2:+:42738409..42742056

Molecular Weight (calculated)

32555.3 Da

IEP (calculated)

9.412

GRAVY (calculated)

0.059

Length

300 amino acids

Sequence
(BLAST)

001: MEASSGYKDY VAGLMAGVAT VITGHPFDTV KVRLQKYNTE AGAVKYKNAR KFGSVYLDVL VVEHDTQNYM SNFSVVCNPV KGLYRGAASS FIGMAFESSL
101: SFGIYSQTKR FLQGEIDGDK PQPHAIVPSA AFGGAIISFI LCPSELVKCR MQVQGSDFMV PKSTRFSGPL ECALKTVQEE GLKGASSESR QLIDVGVGIM
201: SGGLGGIAFW SAVLPLDVAK TIIQTTPEKN HSRNPFSIYR RSGLRGCYTG LGPTLVRAFP ANAAAIVAWE LSAKTTYFAL EELGPVRFQH IFGTFRYIIR

Best Arabidopsis Sequence Match ( AT2G33820.3 )
(BLAST)

001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV YFHCTLFVKG LYRGATSSFM GMAFESSLMF
101: GIYSQAKLFL RGTLPDDGPR PEIIVPSAMF GGAIISFVLC PTELVKCRMQ IQGTDSLVPN FRRYNSPLDC AVQTVKNDGV TGIFRGGSAT LLRECTGNAV
201: FFTVYEYLRY HIHSRLEDSK LKDGYLVDMG IGVLTGGLGG IACWSAVLPF DVAKTIIQTS SEKATERNPF KVLSSIHKRA GLKGCYAGLG PTIVRAFPAN
301: AAAIVAWEFS MKMLGIKRD

Arabidopsis Description

ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.