Factsheet for PGSC0003DMT400076450

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058719	Potato	cytosol, mitochondrion, nucleus	76.15	81.64
Solyc02g077910.2.1	Tomato	cytosol, endoplasmic reticulum, plastid	70.95	77.33
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	67.89	73.27
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	58.1	69.09
KRH50090	Soybean	cytosol	63.61	68.2
CDY57210	Canola	cytosol, peroxisome, plastid	62.69	67.43
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	62.39	67.11
CDY37683	Canola	cytosol, peroxisome, plastid	62.39	67.11
KRH65469	Soybean	extracellular	25.69	66.67
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	62.39	66.67
KRH62946	Soybean	extracellular	21.41	64.81
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	62.08	63.64
TraesCS4B01G307000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	58.1	62.09
TraesCS4A01G407600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	58.1	62.09
TraesCS4D01G305200.1	Wheat	cytosol	57.8	61.76
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	57.19	61.11
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	57.19	61.11
Zm00001d032430_P002	Maize	mitochondrion	56.88	60.78
Os11t0423800-01	Rice	nucleus	25.38	58.04
PGSC0003DMT400019719	Potato	cytosol	9.17	34.88
PGSC0003DMT400005377	Potato	cytosol	30.58	34.13
PGSC0003DMT400021041	Potato	cytosol, mitochondrion, plastid	30.58	33.67
PGSC0003DMT400014293	Potato	cytosol, mitochondrion, plastid	26.3	29.05
PGSC0003DMT400042642	Potato	cytosol	26.61	27.62
PGSC0003DMT400047378	Potato	cytosol	17.43	19.72
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	20.18	19.08
PGSC0003DMT400037834	Potato	cytosol	17.43	17.98
PGSC0003DMT400052443	Potato	vacuole	17.74	17.74
PGSC0003DMT400041633	Potato	cytosol	17.43	17.59
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	14.98	16.5
PGSC0003DMT400043390	Potato	cytosol, plastid	18.04	14.15

Protein Annotations

EnsemblPlants:PGSC0003DMT400076450	EnsemblPlantsGene:PGSC0003DMG400029730	EntrezGene:102583191	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF388	PFAM:PF00153	PFscan:PS50920	PGSC:PGSC0003DMG400029730	RefSeq:XP_006347012.1	SEG:seg
SUPFAM:SSF103506	UniParc:UPI0002968C7E	UniProt:M1CWT1	MapMan:4.1.1.3	MapMan:24.2.13	:

Description

Mitochondrial amino acid carrier [Source:PGSC_GENE;Acc:PGSC0003DMG400029730]

Coordinates

chr2:+:33691048..33694036

Molecular Weight (calculated)

35351.9 Da

IEP (calculated)

9.650

GRAVY (calculated)

0.102

Length

327 amino acids

Sequence
(BLAST)

001: MEASSGYKDY VAGLVAGVAT VITGHPFDTV KVKLQKYNTE AGGAKYKNGL HCATRILQTE GVKGLYRGAT SSFIGMAFES SLSFGIYSQT KRFLQGEIDG
101: GKPQPHAIVP SAAFGGAIIS FILCPSELVK VSDARVPNFL LYLEYHLCNV VFQCRMQVQG TDFMVAKSTR FSGPRECALK TVQQEGLTGM FRGGLATLLR
201: ESVGNAVFFS TYEYARYFMH LQLKGASSES TQLIDVGVGL MSGGLGGIAF WSAVLPLDVA KTIIQTTPEK NHSRNPFSVL NLIYRRSGLR GCYTGLGPTL
301: VRAFPANAAA IVAWELSAKL LGIRRDQ

Best Arabidopsis Sequence Match ( AT2G33820.1 )
(BLAST)

001: MGESKTTTGE GFGFYKEYVA GMMAGLATVA VGHPFDTVKV KLQKHNTDVQ GLRYKNGLHC ASRILQTEGV KGLYRGATSS FMGMAFESSL MFGIYSQAKL
101: FLRGTLPDDG PRPEIIVPSA MFGGAIISFV LCPTELVKCR MQIQGTDSLV PNFRRYNSPL DCAVQTVKND GVTGIFRGGS ATLLRECTGN AVFFTVYEYL
201: RYHIHSRLED SKLKDGYLVD MGIGVLTGGL GGIACWSAVL PFDVAKTIIQ TSSEKATERN PFKVLSSIHK RAGLKGCYAG LGPTIVRAFP ANAAAIVAWE
301: FSMKMLGIKR D

Arabidopsis Description

ATMBAC1Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT2G33820]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.