CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25603	Canola	cytosol	99.05	99.05
Bra030231.1-P	Field mustard	cytosol	98.42	98.42
CDX76916	Canola	cytosol	95.27	95.87
CDY13754	Canola	cytosol	94.32	94.92
AT2G22500.1	Thale cress	cytosol	86.44	87.54
CDX97871	Canola	cytosol	27.76	80.0
GSMUA_Achr10P...	Banana	mitochondrion	36.28	78.23
CDY27701	Canola	cytosol	82.97	77.35
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	14.2	72.58
GSMUA_Achr5P17950_001	Banana	cytosol	63.09	72.46
TraesCS5D01G307000.1	Wheat	cytosol	73.5	72.36
TraesCS5B01G300300.2	Wheat	cytosol	73.82	72.0
GSMUA_Achr3P06760_001	Banana	cytosol	61.51	71.96
TraesCS5A01G300800.1	Wheat	cytosol	73.5	71.91
HORVU5Hr1G078950.1	Barley	cytosol	73.19	71.38
CDY03439	Canola	cytosol, plasma membrane, plastid	70.66	71.11
CDY34292	Canola	cytosol, plasma membrane, plastid	70.03	70.48
EES15143	Sorghum	cytosol	72.87	70.21
Zm00001d031833_P001	Maize	mitochondrion	70.66	68.71
TraesCS5D01G252800.1	Wheat	cytosol	66.88	65.63
TraesCS5B01G243600.1	Wheat	cytosol	66.88	65.63
TraesCS5A01G246300.1	Wheat	cytosol	66.56	65.33
CDX81127	Canola	plasma membrane	61.2	57.91
CDY67400	Canola	plasma membrane	60.88	57.61
Os09t0465400-00	Rice	plastid	65.3	51.88
HORVU5Hr1G069700.1	Barley	plastid	66.25	51.72
CDY02849	Canola	plasma membrane	36.28	38.08
CDY32672	Canola	plasma membrane	36.28	38.08
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.28	37.7
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.28	37.7
CDX80317	Canola	endoplasmic reticulum, plasma membrane	36.28	37.7
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	35.96	37.5
CDY51585	Canola	plasma membrane	35.96	37.5
CDY13183	Canola	plasma membrane	32.18	36.3
CDX76170	Canola	cytosol, peroxisome, plastid	34.38	35.74
CDX88877	Canola	cytosol	33.12	35.12
CDY35862	Canola	cytosol	32.81	34.78
CDX92503	Canola	cytosol	32.81	34.78
CDY44940	Canola	cytosol	32.81	34.78
CDY42293	Canola	cytosol	32.81	34.78
CDY33772	Canola	mitochondrion	33.12	34.09
CDX70888	Canola	cytosol, extracellular, plastid	27.13	33.73
CDY55007	Canola	cytosol, peroxisome, plasma membrane	37.54	32.6
CDX97299	Canola	extracellular	24.92	31.73
CDY21942	Canola	plastid	30.6	30.79
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	30.28	30.57
CDX91241	Canola	cytosol	27.76	30.34
CDY11206	Canola	cytosol	25.55	23.96
CDY37683	Canola	cytosol, peroxisome, plastid	22.71	23.68
CDY57210	Canola	cytosol, peroxisome, plastid	22.4	23.36
CDX87675	Canola	cytosol, mitochondrion, plastid	21.45	22.82
CDY37150	Canola	cytosol, mitochondrion, plastid	21.45	22.67
CDY35182	Canola	cytosol, mitochondrion, plastid	21.14	22.33
CDY03190	Canola	cytosol, mitochondrion, plastid	21.14	22.33
CDY58507	Canola	cytosol, mitochondrion, plastid	20.5	21.67
CDX77693	Canola	cytosol, mitochondrion, plastid	20.5	21.67
CDX87281	Canola	cytosol, mitochondrion, plastid	20.82	21.15
CDX91242	Canola	extracellular	1.26	21.05
CDY58780	Canola	cytosol, mitochondrion, plastid	20.5	20.83
CDX80777	Canola	cytosol	25.55	19.95

Protein Annotations

EnsemblPlants:CDX89481	EnsemblPlantsGene:GSBRNA2T00149745001	Gene3D:1.50.40.10	GO:A0A078DJU4	GO:GO:0006810	GO:GO:0008150
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	ProteinID:CDX89481
ProteinID:CDX89481.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EF484E	MapMan:24.2.13	:

Description

BnaC04g35000D

Coordinates

chrLK031859:-:293827..294780

Molecular Weight (calculated)

33841.5 Da

IEP (calculated)

10.651

GRAVY (calculated)

0.145

Length

317 amino acids

Sequence
(BLAST)

001: MGLKGFAEGG IASIVAGCST HPLDLIKVRM QLQGESAPVQ TNLRPALAFQ TSSSSAVHAP PPPPRVGIIG IGSRIIRQEG TRALFSGVSA TVLRQTLYST
101: TRMGLYDILK TKWTDPETKS IPLTRKLAAG FIAGGIGAAV GNPADVAMVR MQADGRLPLV DRRNYKSVLD AIAQMVRGEG VTSLWRGSSM TINRAMLVTA
201: SQLATYDSVK ETILEKGLMR DGLGTHVTSS FAAGFVASVA SNPVDVIKTR VMNMKVVAGT APPYKGAVDC ALKTVRAEGI MALYKGFWPT VSRQAPFTVI
301: LFVTLEQVKK VLKDFDF

Best Arabidopsis Sequence Match ( AT2G22500.1 )
(BLAST)

001: MGLKGFAEGG IASIVAGCST HPLDLIKVRM QLQGESAPIQ TNLRPALAFQ TSTTVNAPPL RVGVIGVGSR LIREEGMRAL FSGVSATVLR QTLYSTTRMG
101: LYDIIKGEWT DPETKTMPLM KKIGAGAIAG AIGAAVGNPA DVAMVRMQAD GRLPLTDRRN YKSVLDAITQ MIRGEGVTSL WRGSSLTINR AMLVTSSQLA
201: SYDSVKETIL EKGLLKDGLG THVSASFAAG FVASVASNPV DVIKTRVMNM KVVAGVAPPY KGAVDCALKT VKAEGIMSLY KGFIPTVSRQ APFTVVLFVT
301: LEQVKKLFKD YDF

Arabidopsis Description

PUMP5Mitochondrial uncoupling protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.