CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006516.1-P	Field mustard	cytosol	100.0	100.0
CDY35862	Canola	cytosol	97.32	97.32
CDY44940	Canola	cytosol	96.99	96.99
CDX92503	Canola	cytosol	96.66	96.66
CDY42293	Canola	cytosol	96.66	96.66
CDX70888	Canola	cytosol, extracellular, plastid	81.27	95.29
Solyc01g005620.2.1	Tomato	plastid	85.28	85.86
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	84.28	84.85
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	84.95	84.39
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	82.94	82.94
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	82.94	82.94
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	82.61	82.61
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	82.27	82.27
TraesCS1A01G124600.1	Wheat	golgi, unclear	82.94	82.12
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	82.94	82.12
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	82.94	82.12
Os05t0208000-01	Rice	cytosol, extracellular, peroxisome	83.95	82.03
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	82.27	82.0
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	82.27	81.46
Os11t0432400-01	Rice	cytosol	82.94	80.26
Zm00001d037725_P001	Maize	plastid	82.61	80.19
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	82.61	80.19
HORVU3Hr1G025820.1	Barley	plasma membrane	81.61	79.74
Zm00001d037727_P001	Maize	plastid	82.61	79.42
TraesCS3B01G153900.1	Wheat	golgi	81.27	79.41
TraesCS3D01G136800.1	Wheat	golgi	81.27	79.15
TraesCS3A01G135800.1	Wheat	cytosol	80.6	78.76
VIT_06s0004g00470.t01	Wine grape	cytosol	81.94	71.01
CDY34292	Canola	cytosol, plasma membrane, plastid	37.79	35.87
CDY03439	Canola	cytosol, plasma membrane, plastid	37.46	35.56
CDY25603	Canola	cytosol	35.45	33.44
CDY13754	Canola	cytosol	35.12	33.33
CDX89481	Canola	cytosol	35.12	33.12
CDX76916	Canola	cytosol	34.78	33.02
CDX81127	Canola	plasma membrane	36.79	32.84
CDY67400	Canola	plasma membrane	36.45	32.54
CDY33772	Canola	mitochondrion	32.11	31.17
CDX97871	Canola	cytosol	11.37	30.91
CDY32672	Canola	plasma membrane	31.1	30.79
CDY02849	Canola	plasma membrane	30.77	30.46
CDY13183	Canola	plasma membrane	28.43	30.25
CDX80317	Canola	endoplasmic reticulum, plasma membrane	30.1	29.51
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.77	29.28
CDY51585	Canola	plasma membrane	29.77	29.28
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.1	28.52
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.1	28.52
CDX76170	Canola	cytosol, peroxisome, plastid	28.43	27.87
CDY27701	Canola	cytosol	29.43	25.88
CDY55007	Canola	cytosol, peroxisome, plasma membrane	31.1	25.48
CDY21942	Canola	plastid	26.76	25.4
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	26.42	25.16
CDX97299	Canola	extracellular	20.74	24.9
CDX91241	Canola	cytosol	23.08	23.79
CDY03190	Canola	cytosol, mitochondrion, plastid	22.74	22.67
CDX87675	Canola	cytosol, mitochondrion, plastid	22.41	22.48
CDY37150	Canola	cytosol, mitochondrion, plastid	22.41	22.33
CDY35182	Canola	cytosol, mitochondrion, plastid	22.41	22.33
CDY58507	Canola	cytosol, mitochondrion, plastid	22.07	22.0
CDX77693	Canola	cytosol, mitochondrion, plastid	21.74	21.67
CDY11206	Canola	cytosol	23.41	20.71
CDY37683	Canola	cytosol, peroxisome, plastid	18.73	18.42
CDY57210	Canola	cytosol, peroxisome, plastid	18.39	18.09
CDX87281	Canola	cytosol, mitochondrion, plastid	18.73	17.95
CDY58780	Canola	cytosol, mitochondrion, plastid	18.39	17.63
CDX80777	Canola	cytosol	23.75	17.49
CDX91242	Canola	extracellular	1.0	15.79

Protein Annotations

EnsemblPlants:CDX88877	EnsemblPlantsGene:GSBRNA2T00148966001	Gene3D:1.50.40.10	GO:A0A078DIW4	GO:GO:0006810	GO:GO:0008150
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PANTHER:PTHR24089	PANTHER:PTHR24089:SF427	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	ProteinID:CDX88877
ProteinID:CDX88877.1	SUPFAM:SSF103506	UniParc:UPI000253FF58	MapMan:5.1.1.1	MapMan:24.2.13	:

Description

BnaA03g07720D

Coordinates

chrLK031856:+:1407800..1410034

Molecular Weight (calculated)

31886.2 Da

IEP (calculated)

9.469

GRAVY (calculated)

0.152

Length

299 amino acids

Sequence
(BLAST)

001: MAEEKKVAPI GIWTAVKPFV NGGASGMLAT CVIQPIDMIK VRIQLGQGSA ASVTTTMLKN EGIGAFYKGL SAGLLRQATY TTARLGSFKM LTAKASEAND
101: GKPLPLYQKA LCGLTAGAIG ACVGSPADLA LIRMQADNTL PLAQRRNYTN AFHALYRISA DEGVLALWKG CGPTVVRAMA LNMGMLASYD QSAEYMRDNL
201: GLGETSTVVG ASAVSGFCAA ACSLPFDFVK TQIQKMQPDA QGKYPYTGSL DCAMQTLKSG GPLKFYTGFP VYCVRIAPHV MMTWIFLNQI TKFQKNIGM

Best Arabidopsis Sequence Match ( AT5G19760.1 )
(BLAST)

001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM

Arabidopsis Description

DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.