Factsheet for Zm00001d037725_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037727_P001	Maize	plastid	98.7	97.75
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	96.43	96.43
Zm00001d010020_P001	Maize	mitochondrion	41.88	95.56
Os05t0208000-01	Rice	cytosol, extracellular, peroxisome	93.18	93.79
TraesCS3D01G136800.1	Wheat	golgi	89.61	89.9
TraesCS3B01G153900.1	Wheat	golgi	89.29	89.87
TraesCS3A01G135800.1	Wheat	cytosol	88.64	89.22
HORVU3Hr1G025820.1	Barley	plasma membrane	88.64	89.22
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	86.04	88.63
TraesCS1D01G129200.2	Wheat	cytosol, extracellular, peroxisome	86.36	88.08
TraesCS1B01G142400.1	Wheat	cytosol, extracellular, peroxisome	86.36	88.08
TraesCS1A01G124600.1	Wheat	golgi, unclear	86.36	88.08
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	86.04	87.75
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	85.06	87.63
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	85.06	87.63
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	84.42	86.96
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	84.09	86.33
Bra002259.1-P	Field mustard	cytosol	70.45	83.78
CDX92503	Canola	cytosol	81.17	83.61
AT5G19760.1	Thale cress	cytosol	80.52	83.22
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	81.17	83.06
CDY44940	Canola	cytosol	80.52	82.94
CDY42293	Canola	cytosol	80.52	82.94
CDY35862	Canola	cytosol	80.52	82.94
PGSC0003DMT400081953	Potato	cytosol, peroxisome, plastid	79.87	82.83
CDX88877	Canola	cytosol	80.19	82.61
Bra020060.1-P	Field mustard	cytosol	80.19	82.61
Bra006516.1-P	Field mustard	cytosol	80.19	82.61
CDX70888	Canola	cytosol, extracellular, plastid	63.64	76.86
Solyc01g021740.1.1	Tomato	cytosol, peroxisome, plastid	28.57	75.21
VIT_06s0004g00470.t01	Wine grape	cytosol	77.6	69.28
Zm00001d031833_P001	Maize	mitochondrion	37.34	35.28
Zm00001d048583_P001	Maize	mitochondrion	29.87	29.68
Zm00001d024951_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	28.9	29.37
Zm00001d003511_P001	Maize	mitochondrion	26.95	27.3
Zm00001d004561_P001	Maize	plasma membrane	24.03	25.61
Zm00001d023895_P007	Maize	mitochondrion	22.73	23.49
Zm00001d028753_P003	Maize	plastid	23.05	19.4
Zm00001d032430_P002	Maize	mitochondrion	19.16	19.28
Zm00001d008974_P001	Maize	cytosol	17.86	16.42

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100274318	MapMan:24.2.13	MapMan:5.1.1.1	ProteinID:AQK84662.1	UniProt:B4FBF6
EMBL:BT034444	EMBL:BT042761	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF427
SUPFAM:SSF103506	UniParc:UPI0000E6488E	EnsemblPlantsGene:Zm00001d037725	EnsemblPlants:Zm00001d037725_P001	EnsemblPlants:Zm00001d037725_T001	SEG:seg

Description

Mitochondrial dicarboxylate/tricarboxylate transporter DTC

Coordinates

chr6:-:135244800..135248890

Molecular Weight (calculated)

33149.4 Da

IEP (calculated)

10.219

GRAVY (calculated)

0.032

Length

308 amino acids

Sequence
(BLAST)

001: MADAKQQQQQ PQQAAAAATG VWKTVKPFVN GGASGMLATC VIQPIDMVKV RIQLGEGSAG QVTRNMLANE GVRSFYKGLS AGLLRQATYT TARLGSFRVL
101: TNKAVEKNEG KPLPLIQKAF IGLTAGAIGA CFGSPADLAL IRMQADSTLP AAQRRNYKNA FHALYRISAD EGVLALWKGA GPTVVRAMAL NMGMLASYDQ
201: SVELFRDKFG AGEISTVVGA SAVSGFFASA CSLPFDYVKT QIQKMQPDAN GKYPYTGSLD CAVKTFKSGG PFKFYTGFPV YCVRIAPHVM MTWIFLNQIQ
301: KFEKKIGI

Best Arabidopsis Sequence Match ( AT5G19760.1 )
(BLAST)

001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM

Arabidopsis Description

DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.