Factsheet for Zm00001d048583_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0707800-01	Rice	mitochondrion	90.65	93.36
TraesCS4A01G179400.1	Wheat	cytosol	89.03	90.79
TraesCS4D01G134300.1	Wheat	golgi	89.03	90.79
TraesCS4B01G139600.1	Wheat	cytosol	88.71	90.46
OQU84127	Sorghum	golgi, plasma membrane, plastid	97.74	79.53
HORVU4Hr1G027150.1	Barley	cytosol, plasma membrane, plastid	88.71	68.75
Zm00001d024951_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	67.1	68.65
Zm00001d004561_P001	Maize	plasma membrane	57.42	61.59
Zm00001d031833_P001	Maize	mitochondrion	39.03	37.12
Zm00001d010020_P001	Maize	mitochondrion	16.13	37.04
Zm00001d003511_P001	Maize	mitochondrion	33.55	34.21
Zm00001d037725_P001	Maize	plastid	29.68	29.87
Zm00001d037727_P001	Maize	plastid	29.68	29.58
Zm00001d023895_P007	Maize	mitochondrion	28.06	29.19
Zm00001d028753_P003	Maize	plastid	25.16	21.31
Zm00001d032430_P002	Maize	mitochondrion	20.32	20.59
Zm00001d008974_P001	Maize	cytosol	21.29	19.7

Protein Annotations

Gene3D:1.50.40.10	MapMan:2.4.2.3	MapMan:24.2.13	EntrezGene:542748	EMBL:AF461732	ProteinID:AQK48220.1
EMBL:BT055883	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966
InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_uncoupling_UCP-like	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF622	UniProt:Q8S4C4	SUPFAM:SSF103506
UniParc:UPI000009F2ED	EnsemblPlantsGene:Zm00001d048583	EnsemblPlants:Zm00001d048583_P001	EnsemblPlants:Zm00001d048583_T001	SEG:seg	:

Description

uncoupling protein homolog3Thioesterase family protein%2C mRNA

Coordinates

chr4:-:220381..224895

Molecular Weight (calculated)

32810.0 Da

IEP (calculated)

10.013

GRAVY (calculated)

0.190

Length

310 amino acids

Sequence
(BLAST)

001: MPGDHGSKGD ISFAGRFTAS AIAACFAEIC TIPLDTAKVR LQLQKNVVAA AASGDAAPAL PKYRGLLGTA ATIAREEGAA ALWKGIVPGL HRQCIYGGLR
101: IGLYEPVKSF YVGKDHVGDV PLSKKIAAGF TTGAIAISIA NPTDLVKVRL QAEGKLAPGV PRRYTGAMDA YSKIARQEGV AALWTGLGPN VARNAIINAA
201: ELASYDQVKQ SILKLPGFKD DVVTHLFAGL GAGFFAVCVG SPVDVVKSRM MGDSAYKSTL DCFVKTLKND GPLAFYKGFL PNFARLGSWN VIMFLTLEQV
301: QKLFVRKATS

Best Arabidopsis Sequence Match ( AT3G54110.1 )
(BLAST)

001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN

Arabidopsis Description

PUMP1UCP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V8U1]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.