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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
mitochondrion: 19010998
mitochondrion: 20720170
mitochondrion: 23027867
plastid: 27992503
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 20720170 doi
NL Taylor, KA Howell, JL Heazlewood, TY Tan, R Narsai, S Huang, J Whelan, AH Millar
Australian Research Council Centre of Excellence for Plant Energy Biology, University of Western Australia, Crawley, Western Australia, Australia.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048583_P001 Maize mitochondrion 93.36 90.65
TraesCS4A01G179400.1 Wheat cytosol 90.7 89.8
TraesCS4B01G139600.1 Wheat cytosol 90.7 89.8
TraesCS4D01G134300.1 Wheat golgi 90.7 89.8
OQU84127 Sorghum golgi, plasma membrane, plastid 93.36 73.75
HORVU4Hr1G027150.1 Barley cytosol, plasma membrane, plastid 90.37 68.0
Os04t0449000-02 Rice cytosol 33.22 32.47
Os11t0432400-01 Rice cytosol 30.23 29.45
Os12t0533800-01 Rice endoplasmic reticulum, extracellular 22.59 29.44
Os05t0208000-01 Rice cytosol, extracellular, peroxisome 29.24 28.76
Os09t0465400-00 Rice plastid 35.55 26.82
Os10t0573800-01 Rice cytosol 24.25 24.66
Os10t0573700-01 Rice mitochondrion 25.58 24.37
Os03t0292200-01 Rice peroxisome 24.92 23.66
Os11t0423800-01 Rice nucleus 10.63 22.38
Os01t0225000-00 Rice cytosol 22.26 20.81
Protein Annotations
Gene3D:1.50.40.10MapMan:2.4.2.3MapMan:24.2.13EntrezGene:4351228ProteinID:ABA95530.1EMBL:AK061318
ProteinID:BAF28922.2ProteinID:BAT15425.1ProteinID:EEE52585.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0006810
GO:GO:0006839GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0017077GO:GO:0031966
GO:GO:1902600GO:GO:1990542InterPro:IPR018108InterPro:IPR023395InterPro:Mit_uncoupling_UCP-likeInterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sfEnsemblPlantsGene:Os11g0707800EnsemblPlants:Os11t0707800-01PFAM:PF00153PRINTS:PR00784PFscan:PS50920
PANTHER:PTHR24089PANTHER:PTHR24089:SF622UniProt:Q2QZ12SUPFAM:SSF103506UniParc:UPI0000681BFBRefSeq:XP_015616794.1
SEG:seg:::::
Description
uncoupling protein 2Uncoupling protein. (Os11t0707800-01)
Coordinates
chr11:+:28961344..28965025
Molecular Weight (calculated)
32093.2 Da
IEP (calculated)
9.936
GRAVY (calculated)
0.169
Length
301 amino acids
Sequence
(BLAST)
001: MPEHGSKPDI SFAGRFTASA IAACFAEVCT IPLDTAKVRL QLQKNVAADA APKYRGLLGT AATIAREEGA AALWKGIVPG LHRQCIYGGL RIGLYEPVKS
101: FYVGKDHVGD VPLTKKIAAG FTTGAIAISI ANPTDLVKVR LQAEGKLAPG APRRYAGAMD AYAKIVRQEG FAALWTGIGP NVARNAIINA AELASYDQVK
201: QTILKLPGFK DDVVTHLLSG LGAGFFAVCV GSPVDVVKSR MMGDSAYTST IDCFVKTLKN DGPLAFYKGF LPNFARLGSW NVIMFLTLEQ VQKLFVRKPG
301: S
Best Arabidopsis Sequence Match ( AT3G54110.1 )
(BLAST)
001: MVAAGKSDLS LPKTFACSAF AACVGEVCTI PLDTAKVRLQ LQKSALAGDV TLPKYRGLLG TVGTIAREEG LRSLWKGVVP GLHRQCLFGG LRIGMYEPVK
101: NLYVGKDFVG DVPLSKKILA GLTTGALGIM VANPTDLVKV RLQAEGKLAA GAPRRYSGAL NAYSTIVRQE GVRALWTGLG PNVARNAIIN AAELASYDQV
201: KETILKIPGF TDNVVTHILS GLGAGFFAVC IGSPVDVVKS RMMGDSGAYK GTIDCFVKTL KSDGPMAFYK GFIPNFGRLG SWNVIMFLTL EQAKKYVREL
301: DASKRN
Arabidopsis Description
PUMP1UCP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V8U1]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.