Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- extracellular 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G129200.2 | Wheat | cytosol, extracellular, peroxisome | 99.34 | 99.34 |
| TraesCS1B01G142400.1 | Wheat | cytosol, extracellular, peroxisome | 99.34 | 99.34 |
| TraesCS1A01G124600.1 | Wheat | golgi, unclear | 99.34 | 99.34 |
| Os05t0208000-01 | Rice | cytosol, extracellular, peroxisome | 90.4 | 89.22 |
| EES17872 | Sorghum | cytosol, extracellular, peroxisome, plastid | 88.74 | 87.01 |
| Zm00001d037725_P001 | Maize | plastid | 87.75 | 86.04 |
| HORVU3Hr1G025820.1 | Barley | plasma membrane | 87.09 | 85.95 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 84.44 | 85.0 |
| GSMUA_Achr9P28780_001 | Banana | cytosol, peroxisome, plastid | 84.11 | 84.95 |
| Zm00001d037727_P001 | Maize | plastid | 87.42 | 84.89 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 83.77 | 84.62 |
| GSMUA_Achr6P14540_001 | Banana | cytosol, mitochondrion, plastid | 83.44 | 84.28 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plastid | 83.44 | 84.28 |
| Bra002259.1-P | Field mustard | cytosol | 71.85 | 83.78 |
| CDX92503 | Canola | cytosol | 82.12 | 82.94 |
| CDY44940 | Canola | cytosol | 81.79 | 82.61 |
| CDY42293 | Canola | cytosol | 81.46 | 82.27 |
| CDY35862 | Canola | cytosol | 81.46 | 82.27 |
| Bra006516.1-P | Field mustard | cytosol | 81.46 | 82.27 |
| Bra020060.1-P | Field mustard | cytosol | 81.46 | 82.27 |
| CDX88877 | Canola | cytosol | 81.46 | 82.27 |
| AT5G19760.1 | Thale cress | cytosol | 81.13 | 82.21 |
| KRH42853 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 81.79 | 82.06 |
| PGSC0003DMT400081953 | Potato | cytosol, peroxisome, plastid | 80.13 | 81.48 |
| CDX70888 | Canola | cytosol, extracellular, plastid | 64.9 | 76.86 |
| Solyc01g021740.1.1 | Tomato | cytosol, peroxisome, plastid | 28.81 | 74.36 |
| VIT_06s0004g00470.t01 | Wine grape | cytosol | 79.8 | 69.86 |
| HORVU5Hr1G078970.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 7.62 | 37.1 |
| HORVU5Hr1G078950.1 | Barley | cytosol | 36.76 | 34.15 |
| HORVU3Hr1G043380.11 | Barley | plasma membrane, vacuole | 26.49 | 27.78 |
| HORVU5Hr1G069700.1 | Barley | plastid | 36.76 | 27.34 |
| HORVU5Hr1G026160.2 | Barley | mitochondrion, plastid | 24.5 | 24.58 |
| HORVU4Hr1G027150.1 | Barley | cytosol, plasma membrane, plastid | 29.14 | 22.0 |
| HORVU4Hr1G056100.1 | Barley | mitochondrion | 21.85 | 18.75 |
| HORVU4Hr1G078670.2 | Barley | cytosol, mitochondrion, plasma membrane | 17.88 | 17.65 |
| HORVU1Hr1G050130.3 | Barley | vacuole | 16.23 | 15.17 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G028720.1 | EnsemblPlantsGene:HORVU1Hr1G028720 | Gene3D:1.50.40.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF427 |
| PFAM:PF00153 | PFscan:PS50920 | SUPFAM:SSF103506 | TMHMM:TMhelix | UniParc:UPI000B488465 | UniProt:A0A287F0Q7 |
| MapMan:5.1.1.1 | MapMan:24.2.13 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:157548928..157553107
Molecular Weight (calculated)
32407.7 Da
IEP (calculated)
9.899
GRAVY (calculated)
0.076
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAKQQQAA APTGVWKTIK PFVNGGASGM LATCVIQPID MIKVKIQLGE GSAAQVAKTM YANEGLGSFY KGLSAGLLRQ ATYTTARLGS FRVLTNKAIE
101: ANDGRPLPLV QKAFIGLTAG AIGACVGSPA DLALIRMQAD STLPAAQRRH YKNAFHALYR ITADEGVLAL WKGAGPTVVR AMSLNMGMLA SYDQSVELFR
201: DKLGAGEYQT VIGASAISGF CAAACSLPFD YVKTQIQKMQ PDATGKYPYT GSLDCAMQTM KTGGPFKFYS GFPVYCVRIA PHVMMTWLFL NQIQKYQKKI
301: GI
101: ANDGRPLPLV QKAFIGLTAG AIGACVGSPA DLALIRMQAD STLPAAQRRH YKNAFHALYR ITADEGVLAL WKGAGPTVVR AMSLNMGMLA SYDQSVELFR
201: DKLGAGEYQT VIGASAISGF CAAACSLPFD YVKTQIQKMQ PDATGKYPYT GSLDCAMQTM KTGGPFKFYS GFPVYCVRIA PHVMMTWLFL NQIQKYQKKI
301: GI
001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
Arabidopsis Description
DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.