Factsheet for HORVU4Hr1G056100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G110200.1	Wheat	plastid	89.2	96.91
TraesCS4D01G194800.1	Wheat	plastid	88.92	96.01
TraesCS4B01G193900.1	Wheat	plastid	88.35	95.99
Os03t0292200-01	Rice	peroxisome	78.98	87.7
EER95032	Sorghum	plastid	80.68	85.29
GSMUA_Achr7P15600_001	Banana	mitochondrion	43.47	80.53
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	69.32	78.96
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	67.33	77.45
Zm00001d028753_P003	Maize	plastid	80.4	77.32
GSMUA_Achr10P...	Banana	cytosol	49.15	77.23
KRH16814	Soybean	cytosol	67.61	75.32
CDY11206	Canola	cytosol	69.03	71.89
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	69.03	70.23
KRH72424	Soybean	cytosol	66.76	68.71
Bra005690.1-P	Field mustard	cytosol	69.32	60.55
CDX80777	Canola	cytosol	69.32	60.1
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	5.11	29.03
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	21.59	25.25
HORVU3Hr1G043380.11	Barley	plasma membrane, vacuole	19.6	23.96
HORVU3Hr1G025820.1	Barley	plasma membrane	19.89	22.88
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	19.03	21.9
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	18.75	21.85
HORVU5Hr1G078950.1	Barley	cytosol	19.03	20.62
HORVU4Hr1G027150.1	Barley	cytosol, plasma membrane, plastid	21.02	18.5
HORVU1Hr1G050130.3	Barley	vacuole	15.91	17.34
HORVU5Hr1G069700.1	Barley	plastid	19.32	16.75

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A287P5H3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015141	GO:GO:0015744	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:0071422	EnsemblPlantsGene:HORVU4Hr1G056100	EnsemblPlants:HORVU4Hr1G056100.1	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF396
SUPFAM:SSF103506	UniParc:UPI000B46B6B7	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:471099223..471102778

Molecular Weight (calculated)

38215.9 Da

IEP (calculated)

10.823

GRAVY (calculated)

-0.143

Length

352 amino acids

Sequence
(BLAST)

001: AQKWVKKSNR ATIQDPLPRR ACHPLRPAYR TRMASPPSPP PRAEEPRNGG GGRAPIPPYV KAAAGSLGGV MEACCLQPID VVKTRLQLDR AGAYRGIAHC
101: GTTVARAEGV PALWKGLTPF ATHLTLKYAL RLGSNAMLQS AFKDPVTGKV SAQGRLASGF GAGVLEALVI VTPFEVVKIR LQQQKGLSTD LLRYKGPIHC
201: AKTIVREEGI FGLWSGASPT VMRNGTNQAA MFTAKNTIDI FLWKKHEGDG KVLQPWQSMV SGFLAGTAGP ICTGPFDVVK TRLMAQGRTG DIKYKGMFHA
301: IRTIHAEEGL RALWKGLLPR LMRIPPGQAI MWTVADQVMG LYERTYLQSA QV

Best Arabidopsis Sequence Match ( AT5G01340.1 )
(BLAST)

001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL

Arabidopsis Description

SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.