Factsheet for GSMUA_Achr10P23120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P15600_001	Banana	mitochondrion	77.68	91.58
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	81.25	59.48
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	79.02	57.28
Os03t0292200-01	Rice	peroxisome	80.36	56.78
KRH16814	Soybean	cytosol	79.02	56.01
TraesCS4B01G193900.1	Wheat	plastid	77.68	53.7
TraesCS4A01G110200.1	Wheat	plastid	77.68	53.7
TraesCS4D01G194800.1	Wheat	plastid	77.68	53.37
EER95032	Sorghum	plastid	78.57	52.85
CDY11206	Canola	cytosol	77.68	51.48
KRH72424	Soybean	cytosol	78.57	51.46
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	78.57	50.87
HORVU4Hr1G056100.1	Barley	mitochondrion	77.23	49.15
Zm00001d028753_P003	Maize	plastid	79.02	48.36
Bra005690.1-P	Field mustard	cytosol	77.68	43.18
CDX80777	Canola	cytosol	76.79	42.36
GSMUA_Achr7P10030_001	Banana	cytosol, extracellular, golgi, mitochondrion	4.02	25.71
GSMUA_Achr6P30530_001	Banana	cytosol	18.3	24.55
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	29.46	21.29
GSMUA_Achr10P...	Banana	mitochondrion	13.84	21.09
GSMUA_Achr5P13930_001	Banana	cytosol	25.0	18.92
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	24.55	18.58
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	24.55	18.27
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	25.45	17.65
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	23.21	17.39
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	22.32	16.72
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	22.32	16.72
GSMUA_Achr5P17950_001	Banana	cytosol	20.54	16.67
GSMUA_Achr9P03550_001	Banana	cytosol	22.32	16.5
GSMUA_Achr6P33850_001	Banana	cytosol	22.32	16.5
GSMUA_Achr6P15000_001	Banana	plasma membrane	22.32	16.45
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	21.88	16.39
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	21.88	16.33
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	21.43	15.69
GSMUA_Achr3P06760_001	Banana	cytosol	18.75	15.5
GSMUA_Achr1P14700_001	Banana	cytosol	22.77	14.7

Protein Annotations

EnsemblPlants:GSMUA_Achr10P23120_001	EnsemblPlants:GSMUA_Achr10T23120_001	EnsemblPlantsGene:GSMUA_Achr10G23120_001	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF396	PFAM:PF00153	PFscan:PS50920	SUPFAM:SSF103506	UniParc:UPI000296DE06	UniProt:M0RKN7
MapMan:24.2.13	:	:	:	:	:

Description

Putative Succinate/fumarate mitochondrial transporter [Source:GMGC_GENE;Acc:GSMUA_Achr10G23120_001]

Coordinates

chr10:+:27984844..27987579

Molecular Weight (calculated)

24357.9 Da

IEP (calculated)

10.251

GRAVY (calculated)

0.044

Length

224 amino acids

Sequence
(BLAST)

001: MGSNALLQSA FKDAATGDLS NRSRIAAGFG AGVLEALLIV TPFEASHSPN LLQQQKGLRP ELLKYKGPLH CARMIIREEG ILGLWAGAAP TVMRNGTNQA
101: AMFTAKNAFD IVLWKKHEGD GMVLQPWQSM ISGFLAGTAG PICTGPFDVV KTRLMAQSRT GGDAKYKGMV HAIRTIFAEE GLFALWKGLL PRLMRIPPGQ
201: AIMWAVADQV TGLYEKNYVH RVHL

Best Arabidopsis Sequence Match ( AT5G01340.1 )
(BLAST)

001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL

Arabidopsis Description

SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.