Factsheet for GSMUA_Achr7P15600_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
peroxisome 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	91.58	77.68
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	84.74	52.61
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	82.63	50.81
Os03t0292200-01	Rice	peroxisome	84.21	50.47
KRH16814	Soybean	cytosol	83.16	50.0
TraesCS4B01G193900.1	Wheat	plastid	81.05	47.53
TraesCS4D01G194800.1	Wheat	plastid	81.05	47.24
TraesCS4A01G110200.1	Wheat	plastid	80.53	47.22
EER95032	Sorghum	plastid	81.58	46.55
CDY11206	Canola	cytosol	82.63	46.45
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	82.11	45.09
KRH72424	Soybean	cytosol	80.53	44.74
HORVU4Hr1G056100.1	Barley	mitochondrion	80.53	43.47
Zm00001d028753_P003	Maize	plastid	81.05	42.08
Bra005690.1-P	Field mustard	cytosol	82.63	38.96
CDX80777	Canola	cytosol	81.58	38.18
GSMUA_Achr6P30530_001	Banana	cytosol	22.63	25.75
GSMUA_Achr7P10030_001	Banana	cytosol, extracellular, golgi, mitochondrion	4.74	25.71
GSMUA_Achr10P...	Banana	mitochondrion	16.32	21.09
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	28.95	17.74
GSMUA_Achr5P13930_001	Banana	cytosol	26.84	17.23
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	26.32	16.89
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	25.79	16.28
GSMUA_Achr6P14120_001	Banana	cytosol, endoplasmic reticulum, mitochondrion	25.79	15.17
GSMUA_Achr6P14540_001	Banana	cytosol, mitochondrion, plastid	23.68	15.05
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	23.68	15.05
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	23.68	15.05
GSMUA_Achr9P28780_001	Banana	cytosol, peroxisome, plastid	22.63	14.38
GSMUA_Achr6P33850_001	Banana	cytosol	22.63	14.19
GSMUA_Achr9P03550_001	Banana	cytosol	22.63	14.19
GSMUA_Achr6P15000_001	Banana	plasma membrane	22.63	14.14
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	22.11	14.0
GSMUA_Achr5P17950_001	Banana	cytosol	20.0	13.77
GSMUA_Achr4P33320_001	Banana	cytosol, mitochondrion, nucleus	22.11	13.73
GSMUA_Achr1P14700_001	Banana	cytosol	24.74	13.54
GSMUA_Achr3P06760_001	Banana	cytosol	18.42	12.92

Protein Annotations

EnsemblPlants:GSMUA_Achr7P15600_001	EnsemblPlants:GSMUA_Achr7T15600_001	EnsemblPlantsGene:GSMUA_Achr7G15600_001	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF396	PFAM:PF00153	PFscan:PS50920	SUPFAM:SSF103506	UniParc:UPI000296F06C	UniProt:M0THU7
MapMan:24.2.13	:	:	:	:	:

Description

Putative Succinate/fumarate mitochondrial transporter [Source:GMGC_GENE;Acc:GSMUA_Achr7G15600_001]

Coordinates

chr7:+:12524684..12527389

Molecular Weight (calculated)

21001.1 Da

IEP (calculated)

10.606

GRAVY (calculated)

-0.056

Length

190 amino acids

Sequence
(BLAST)

001: MGSNALLQYN CGVVKIRLQQ QKGLRPELLK YKGPIHCARM IIREEGILGL WAGAAPTVMR NGTNQAAMFT AKNAFDVVLW KKHEGDGKVL QPWQSMISGF
101: LAGTAGPICT GPFDVVKTRL MAQSRSGGDV KYKGMVHAIR TIFAEEGLRA LWKGLLPRLM RIPPGQAIMW AVADQVTGLY EKSYLHRAHL

Best Arabidopsis Sequence Match ( AT5G01340.1 )
(BLAST)

001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL

Arabidopsis Description

SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.