CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72424	Soybean	cytosol	94.62	87.43
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	80.7	83.33
GSMUA_Achr7P15600_001	Banana	mitochondrion	50.0	83.16
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	77.85	79.61
GSMUA_Achr10P...	Banana	cytosol	56.01	79.02
Os03t0292200-01	Rice	peroxisome	76.9	76.66
TraesCS4B01G193900.1	Wheat	plastid	75.95	74.07
TraesCS4A01G110200.1	Wheat	plastid	75.95	74.07
CDY11206	Canola	cytosol	79.11	73.96
TraesCS4D01G194800.1	Wheat	plastid	75.63	73.31
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	79.75	72.83
EER95032	Sorghum	plastid	75.32	71.47
HORVU4Hr1G056100.1	Barley	mitochondrion	75.32	67.61
Zm00001d028753_P003	Maize	plastid	75.63	65.3
Bra005690.1-P	Field mustard	cytosol	79.11	62.03
CDX80777	Canola	cytosol	79.11	61.58
KRH39532	Soybean	cytosol, mitochondrion, plastid	26.27	27.95
KRH44361	Soybean	cytosol, mitochondrion, plastid	26.58	27.72
KRH47042	Soybean	cytosol, mitochondrion, plastid	26.58	27.72
KRH74426	Soybean	cytosol, mitochondrion, vacuole	25.63	27.27
KRH23460	Soybean	cytosol, mitochondrion, plastid	24.05	25.76
KRH62186	Soybean	cytosol	24.37	25.67
KRH45454	Soybean	cytosol, mitochondrion, vacuole	24.05	25.59
KRH09864	Soybean	cytosol, mitochondrion, plastid	23.42	25.17
KRH52898	Soybean	cytosol	10.76	25.0
KRH75622	Soybean	cytosol, mitochondrion, vacuole	23.42	24.92
KRG98352	Soybean	plasma membrane, vacuole	23.42	24.92
KRH46454	Soybean	endoplasmic reticulum, plasma membrane, vacuole	20.89	24.63
KRH75799	Soybean	plastid	23.73	24.59
KRH66001	Soybean	mitochondrion	23.73	24.59
KRH34619	Soybean	cytosol	23.73	24.59
KRH69658	Soybean	cytosol	23.73	23.66
KRH74503	Soybean	cytosol	23.73	23.66
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	22.78	23.61
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	22.47	23.59
KRH45564	Soybean	cytosol	23.42	23.57
KRH70113	Soybean	mitochondrion	10.13	23.36
KRH71523	Soybean	plastid	23.42	23.34
KRH49267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.47	23.28
KRH58947	Soybean	cytosol	15.51	23.22
KRH00136	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	23.1	22.05
KRH50090	Soybean	cytosol	20.89	21.64
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	18.04	20.73
KRH62946	Soybean	extracellular	6.01	17.59
KRH65469	Soybean	extracellular	6.96	17.46

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100819173	MapMan:24.2.13	UniProt:A0A0R0GET2	EMBL:ACUP02009017	EnsemblPlantsGene:GLYMA_14G179300
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:IPR018108
InterPro:IPR023395	EnsemblPlants:KRH16814	ProteinID:KRH16814	ProteinID:KRH16814.1	ProteinID:KRH16815.1	ProteinID:KRH16816.1
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF396
SUPFAM:SSF103506	UniParc:UPI0001D16371	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:44066917..44068872

Molecular Weight (calculated)

34641.7 Da

IEP (calculated)

10.275

GRAVY (calculated)

-0.033

Length

316 amino acids

Sequence
(BLAST)

001: MKQDVAQDNT NSYPKKSIPP YMKAISGSLG GIMEASCLQP IDVIKTRLQL DRSGNYKGIL HCGATISRTE GVRALWKGLT PFATHLTLKY SLRMGSNAVL
101: QSAFKDPETG KVSGHGRFLS GFGAGVLEAV IIVTPFEVVK IRLQQQRGLS PELLKYKGPV HCARMIIREE GFCGLWAGVA PTVMRNGTNQ SAMFTAKNAF
201: DVLLWKKDEG DGRVLQPWQS MISGFLAGTA GPICTGPFDV VKTRLMAQSR EGGGVLKYKG MIHAIRTIYA EEGLLALWKG LLPRLMRIPP GQAIMWGVAD
301: QIIGLYERRY LQLSTL

Best Arabidopsis Sequence Match ( AT5G01340.1 )
(BLAST)

001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL

Arabidopsis Description

SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.