CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52898	Soybean	cytosol	42.67	94.12
GSMUA_Achr10P...	Banana	mitochondrion	39.0	79.59
KRH74503	Soybean	cytosol	81.67	77.29
VIT_18s0001g07320.t01	Wine grape	cytosol	82.33	76.47
KRH69658	Soybean	cytosol	80.67	76.34
KRH45564	Soybean	cytosol	76.67	73.25
GSMUA_Achr3P06760_001	Banana	cytosol	66.0	73.06
AT4G24570.1	Thale cress	cytosol	76.0	72.84
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	76.0	72.38
CDY34292	Canola	cytosol, plasma membrane, plastid	76.0	72.38
CDY03439	Canola	cytosol, plasma membrane, plastid	75.67	72.06
GSMUA_Achr5P17950_001	Banana	cytosol	65.33	71.01
TraesCS5D01G307000.1	Wheat	cytosol	74.33	69.25
TraesCS5B01G300300.2	Wheat	cytosol	74.33	68.62
TraesCS5A01G300800.1	Wheat	cytosol	74.0	68.52
Zm00001d031833_P001	Maize	mitochondrion	74.33	68.4
EES15143	Sorghum	cytosol	74.67	68.09
HORVU5Hr1G078950.1	Barley	cytosol	73.67	68.0
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	13.67	66.13
TraesCS5B01G243600.1	Wheat	cytosol	70.0	65.02
TraesCS5D01G252800.1	Wheat	cytosol	69.67	64.71
TraesCS5A01G246300.1	Wheat	cytosol	69.67	64.71
HORVU5Hr1G069700.1	Barley	plastid	70.0	51.72
Os09t0465400-00	Rice	plastid	68.0	51.13
KRH58947	Soybean	cytosol	26.67	37.91
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.67	37.54
KRH75799	Soybean	plastid	37.67	37.05
KRH66001	Soybean	mitochondrion	37.67	37.05
KRG98352	Soybean	plasma membrane, vacuole	36.0	36.36
KRH49267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.67	36.07
KRH00136	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.67	34.14
KRH34619	Soybean	cytosol	33.67	33.11
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	33.67	33.11
KRH46454	Soybean	endoplasmic reticulum, plasma membrane, vacuole	29.33	32.84
KRH71523	Soybean	plastid	31.33	29.65
KRH16814	Soybean	cytosol	25.67	24.37
KRH44361	Soybean	cytosol, mitochondrion, plastid	23.33	23.1
KRH39532	Soybean	cytosol, mitochondrion, plastid	22.67	22.9
KRH74426	Soybean	cytosol, mitochondrion, vacuole	22.67	22.9
KRH47042	Soybean	cytosol, mitochondrion, plastid	23.0	22.77
KRH72424	Soybean	cytosol	25.67	22.51
KRH23460	Soybean	cytosol, mitochondrion, plastid	22.0	22.37
KRH45454	Soybean	cytosol, mitochondrion, vacuole	22.0	22.22
KRH09864	Soybean	cytosol, mitochondrion, plastid	21.67	22.11
KRH75622	Soybean	cytosol, mitochondrion, vacuole	21.67	21.89
KRH50090	Soybean	cytosol	20.33	20.0
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	17.67	19.27
KRH70113	Soybean	mitochondrion	8.33	18.25
KRH62946	Soybean	extracellular	6.33	17.59
KRH65469	Soybean	extracellular	7.0	16.67

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100790234	MapMan:24.2.13	UniProt:A0A0R4J330	EMBL:ACUP02002227	EnsemblPlantsGene:GLYMA_04G092100
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0008272
GO:GO:0015116	GO:GO:0015117	GO:GO:0015131	GO:GO:0015140	GO:GO:0015141	GO:GO:0015297
GO:GO:0015709	GO:GO:0015729	GO:GO:0016020	GO:GO:0016021	GO:GO:0031966	GO:GO:0035435
GO:GO:0071422	GO:GO:0071423	GO:GO:1902356	GO:GO:1902358	InterPro:IPR018108	InterPro:IPR023395
EnsemblPlants:KRH62186	ProteinID:KRH62186	ProteinID:KRH62186.1	InterPro:Mit_uncoupling_UCP-like	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	SUPFAM:SSF103506
UniParc:UPI0001D163BA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:8110169..8111329

Molecular Weight (calculated)

32336.5 Da

IEP (calculated)

10.371

GRAVY (calculated)

0.080

Length

300 amino acids

Sequence
(BLAST)

001: MSLKGFFEGG VASIVAGCTT HPLDLIKVRM QLQETHTLRP AFAFHAPTPM PPPPPSGPIS VGLRIVQSEG LAALFSGVSA TVLRQTLYST TRMGLYDVLK
101: RHWTDPDRGT MPLTRKITAG LVAGGIGAAV GNPADVAMVR MQADGRLPPA ERRNYNGVFD AIRRMSNQEG VGSLWRGSAL TVNRAMIVTA SQLASYDQFK
201: ESILGRGWME DGLGTHVLAS FAAGFVASIA SNPIDVIKTR VMNMKAEAYN GALDCALKTV RAEGPLALYK GFIPTISRQG PFTVVLFVTL EQVRKLFKDF

Best Arabidopsis Sequence Match ( AT4G24570.1 )
(BLAST)

001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF

Arabidopsis Description

PUMP4DIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178URN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.