Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013815.1-P | Field mustard | cytosol, plasma membrane, plastid | 88.5 | 87.94 |
| CDY03439 | Canola | cytosol, plasma membrane, plastid | 88.5 | 87.94 |
| CDY34292 | Canola | cytosol, plasma membrane, plastid | 88.5 | 87.94 |
| KRH52898 | Soybean | cytosol | 34.5 | 79.41 |
| KRH62186 | Soybean | cytosol | 72.84 | 76.0 |
| GSMUA_Achr10P... | Banana | mitochondrion | 35.14 | 74.83 |
| VIT_18s0001g07320.t01 | Wine grape | cytosol | 74.76 | 72.45 |
| AT2G22500.1 | Thale cress | cytosol | 70.93 | 70.93 |
| GSMUA_Achr3P06760_001 | Banana | cytosol | 60.06 | 69.37 |
| GSMUA_Achr5P17950_001 | Banana | cytosol | 60.7 | 68.84 |
| TraesCS5D01G307000.1 | Wheat | cytosol | 70.29 | 68.32 |
| TraesCS5B01G300300.2 | Wheat | cytosol | 70.29 | 67.69 |
| HORVU5Hr1G078950.1 | Barley | cytosol | 70.29 | 67.69 |
| TraesCS5A01G300800.1 | Wheat | cytosol | 69.97 | 67.59 |
| EES15143 | Sorghum | cytosol | 70.61 | 67.17 |
| Zm00001d031833_P001 | Maize | mitochondrion | 69.65 | 66.87 |
| HORVU5Hr1G078970.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 13.1 | 66.13 |
| TraesCS5B01G243600.1 | Wheat | cytosol | 65.81 | 63.78 |
| TraesCS5A01G246300.1 | Wheat | cytosol | 65.5 | 63.47 |
| TraesCS5D01G252800.1 | Wheat | cytosol | 65.5 | 63.47 |
| AT5G09470.1 | Thale cress | extracellular, plasma membrane | 61.02 | 56.68 |
| Os09t0465400-00 | Rice | plastid | 65.5 | 51.38 |
| HORVU5Hr1G069700.1 | Barley | plastid | 66.13 | 50.99 |
| AT5G58970.1 | Thale cress | endoplasmic reticulum, vacuole | 38.34 | 39.34 |
| AT5G19760.1 | Thale cress | cytosol | 37.06 | 38.93 |
| AT3G54110.1 | Thale cress | cytosol, plasma membrane | 36.42 | 37.25 |
| AT1G14140.1 | Thale cress | mitochondrion | 33.23 | 34.1 |
| AT4G03115.3 | Thale cress | cytosol | 30.35 | 27.46 |
| AT5G46800.2 | Thale cress | cytosol | 23.96 | 25.0 |
| AT5G01340.1 | Thale cress | cytosol, mitochondrion, plastid | 24.28 | 24.6 |
| AT1G79900.1 | Thale cress | cytosol | 22.36 | 23.65 |
| AT2G33820.3 | Thale cress | cytosol, mitochondrion, plastid | 20.77 | 20.38 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | EntrezGene:828559 | UniProt:A0A178URN9 | ProteinID:AEE84927.1 | EMBL:AM236863 |
| ArrayExpress:AT4G24570 | EnsemblPlantsGene:AT4G24570 | RefSeq:AT4G24570 | TAIR:AT4G24570 | RefSeq:AT4G24570-TAIR-G | EnsemblPlants:AT4G24570.1 |
| TAIR:AT4G24570.1 | EMBL:AY042859 | EMBL:AY084853 | Unigene:At.20057 | EMBL:BT008712 | ProteinID:CAA23006.1 |
| ProteinID:CAB79367.1 | Symbol:DIC2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005310 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 |
| GO:GO:0006839 | GO:GO:0008150 | GO:GO:0008272 | GO:GO:0015116 | GO:GO:0015117 | GO:GO:0015131 |
| GO:GO:0015140 | GO:GO:0015141 | GO:GO:0015297 | GO:GO:0015709 | GO:GO:0015729 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0035435 | GO:GO:0055085 | GO:GO:0071422 | GO:GO:0071423 | GO:GO:1902356 |
| GO:GO:1902358 | InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_carrier | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf |
| RefSeq:NP_194188.1 | ProteinID:OAO96716.1 | PFAM:PF00153 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00926 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF616 | UniProt:Q9SB52 | SUPFAM:SSF103506 |
| UniParc:UPI000005EC7C | SEG:seg | : | : | : | : |
Description
PUMP4DIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178URN9]
Coordinates
chr4:+:12686459..12687650
Molecular Weight (calculated)
32875.2 Da
IEP (calculated)
10.142
GRAVY (calculated)
0.253
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.