Factsheet for AT5G09470.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81127	Canola	plasma membrane	90.5	91.04
CDY67400	Canola	plasma membrane	90.21	90.75
Bra006022.1-P	Field mustard	plasma membrane	90.21	90.75
GSMUA_Achr10P...	Banana	mitochondrion	28.78	65.99
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	11.57	62.9
GSMUA_Achr5P17950_001	Banana	cytosol	51.34	62.68
Zm00001d031833_P001	Maize	mitochondrion	60.53	62.58
GSMUA_Achr3P06760_001	Banana	cytosol	50.15	62.36
HORVU5Hr1G078950.1	Barley	cytosol	59.35	61.54
TraesCS5D01G307000.1	Wheat	cytosol	58.75	61.49
TraesCS5B01G300300.2	Wheat	cytosol	59.05	61.23
TraesCS5A01G300800.1	Wheat	cytosol	58.75	61.11
EES15143	Sorghum	cytosol	59.64	61.09
AT4G24570.1	Thale cress	cytosol	56.68	61.02
AT2G22500.1	Thale cress	cytosol	55.79	60.06
TraesCS5A01G246300.1	Wheat	cytosol	56.68	59.13
TraesCS5D01G252800.1	Wheat	cytosol	56.68	59.13
TraesCS5B01G243600.1	Wheat	cytosol	56.38	58.82
Os09t0465400-00	Rice	plastid	56.97	48.12
HORVU5Hr1G069700.1	Barley	plastid	56.68	47.04
AT5G58970.1	Thale cress	endoplasmic reticulum, vacuole	33.53	37.05
AT5G19760.1	Thale cress	cytosol	32.05	36.24
AT3G54110.1	Thale cress	cytosol, plasma membrane	32.34	35.62
AT1G14140.1	Thale cress	mitochondrion	29.97	33.11
AT4G03115.3	Thale cress	cytosol	29.08	28.32
AT1G79900.1	Thale cress	cytosol	21.96	25.0
AT5G46800.2	Thale cress	cytosol	21.07	23.67
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	21.07	22.98
AT2G33820.3	Thale cress	cytosol, mitochondrion, plastid	18.99	20.06

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EntrezGene:830806	UniProt:A0A178UKG1	ProteinID:AED91400.1	EMBL:AM236861
ArrayExpress:AT5G09470	EnsemblPlantsGene:AT5G09470	RefSeq:AT5G09470	TAIR:AT5G09470	RefSeq:AT5G09470-TAIR-G	EnsemblPlants:AT5G09470.1
TAIR:AT5G09470.1	EMBL:BT033087	ProteinID:CAC05473.1	Symbol:DIC3	GO:GO:0003674	GO:GO:0005215
GO:GO:0005310	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0008272	GO:GO:0015116
GO:GO:0015117	GO:GO:0015131	GO:GO:0015140	GO:GO:0015141	GO:GO:0015297	GO:GO:0015709
GO:GO:0015729	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	GO:GO:0055085	GO:GO:0071422
GO:GO:0071423	GO:GO:1902356	GO:GO:1902358	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	RefSeq:NP_196509.1	ProteinID:OAO93767.1	PFAM:PF00153	PO:PO:0000293
PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007616	PO:PO:0009025	PO:PO:0009029
PO:PO:0020030	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	UniProt:Q9FY68
SUPFAM:SSF103506	UniParc:UPI00000A066F	SEG:seg	:	:	:

Description

PUMP6DIC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UKG1]

Coordinates

chr5:-:2949132..2950695

Molecular Weight (calculated)

36098.3 Da

IEP (calculated)

10.225

GRAVY (calculated)

0.202

Length

337 amino acids

Sequence
(BLAST)

001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNPNPNLSL DHNLPVKPYR PVFALDSLIG SISLLPLHIH APSSSTRSVM TPFAVGAHIV
101: KTEGPAALFS GVSATILRQM LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS LPLNRRRNYK SVVDAIDRIA
201: RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP
301: MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.