Factsheet for Bra006022.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67400	Canola	plasma membrane	99.4	99.4
CDX81127	Canola	plasma membrane	98.81	98.81
AT5G09470.1	Thale cress	extracellular, plasma membrane	90.75	90.21
GSMUA_Achr10P...	Banana	mitochondrion	28.96	65.99
GSMUA_Achr3P06760_001	Banana	cytosol	51.34	63.47
GSMUA_Achr5P17950_001	Banana	cytosol	52.24	63.41
Zm00001d031833_P001	Maize	mitochondrion	60.3	61.96
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	58.21	61.9
TraesCS5D01G307000.1	Wheat	cytosol	59.4	61.8
EES15143	Sorghum	cytosol	60.6	61.7
HORVU5Hr1G078950.1	Barley	cytosol	59.7	61.54
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	11.34	61.29
TraesCS5B01G300300.2	Wheat	cytosol	59.4	61.23
TraesCS5A01G300800.1	Wheat	cytosol	59.1	61.11
Bra038517.1-P	Field mustard	cytosol	57.01	60.63
Bra030231.1-P	Field mustard	cytosol	56.12	59.31
TraesCS5D01G252800.1	Wheat	cytosol	56.72	58.82
TraesCS5A01G246300.1	Wheat	cytosol	56.72	58.82
TraesCS5B01G243600.1	Wheat	cytosol	56.72	58.82
Os09t0465400-00	Rice	plastid	57.01	47.87
HORVU5Hr1G069700.1	Barley	plastid	56.72	46.8
Bra020342.1-P	Field mustard	plasma membrane	33.73	37.42
Bra002259.1-P	Field mustard	cytosol	28.06	36.29
Bra006516.1-P	Field mustard	cytosol	32.24	36.12
Bra020060.1-P	Field mustard	cytosol	31.64	35.45
Bra007046.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.24	35.41
Bra003170.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	31.94	35.2
Bra014840.1-P	Field mustard	cytosol, peroxisome, plastid	30.75	33.77
Bra026855.1-P	Field mustard	mitochondrion	31.04	33.77
Bra034186.1-P	Field mustard	plastid	29.25	31.21
Bra018517.1-P	Field mustard	cytosol	22.69	30.77
Bra002603.1-P	Field mustard	cytosol	28.66	29.45
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	21.49	23.08
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	20.6	22.7
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	20.0	22.48
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	20.0	22.33
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	20.0	22.33
Bra005690.1-P	Field mustard	cytosol	21.79	18.11

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra006022	EnsemblPlants:Bra006022.1	EnsemblPlants:Bra006022.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005310	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0006835	GO:GO:0006839	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR018108	InterPro:IPR023395	UniProt:M4CP84	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	SUPFAM:SSF103506
UniParc:UPI000253F828	SEG:seg	:	:	:	:

Description

AT5G09470 (E=2e-135) DIC3 | mitochondrial substrate carrier family protein

Coordinates

chrA03:-:1651497..1652916

Molecular Weight (calculated)

35914.9 Da

IEP (calculated)

10.420

GRAVY (calculated)

0.153

Length

335 amino acids

Sequence
(BLAST)

001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNTNHNLDL NLPVKPYRPV FALDSLIGSI SLLPSSTPAP SSSTRSSMTP FAVGAHIVKT
101: EGPAALFSGV SATVLRQMLY SATRMGIYDF LKRKWTDRLT GNFPLVTKIA AGLIAGAVGS AVGNPADVAM VRMQADGRLP FHRRRNYKSV VDAIERIVRH
201: EGVSSLWRGS WLTVNRAMIV TASQLATYDH VKEIMIAGGR GTPGGIGTHA AASFAAGIVA AVASNPIDVV KTRMMNAEAE SYGGPLDCAV KTVAEERPMA
301: LYKGLVPTVT RQGPFTMILF VTLEQIRGLL KDVKF

Best Arabidopsis Sequence Match ( AT5G09470.1 )
(BLAST)

001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNPNPNLSL DHNLPVKPYR PVFALDSLIG SISLLPLHIH APSSSTRSVM TPFAVGAHIV
101: KTEGPAALFS GVSATILRQM LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS LPLNRRRNYK SVVDAIDRIA
201: RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP
301: MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF

Arabidopsis Description

PUMP6DIC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UKG1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.