CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006022.1-P	Field mustard	plasma membrane	98.81	98.81
CDY67400	Canola	plasma membrane	98.81	98.81
AT5G09470.1	Thale cress	extracellular, plasma membrane	91.04	90.5
GSMUA_Achr10P...	Banana	mitochondrion	29.25	66.67
GSMUA_Achr3P06760_001	Banana	cytosol	51.64	63.84
GSMUA_Achr5P17950_001	Banana	cytosol	52.54	63.77
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	11.64	62.9
Zm00001d031833_P001	Maize	mitochondrion	60.9	62.58
TraesCS5D01G307000.1	Wheat	cytosol	60.0	62.42
EES15143	Sorghum	cytosol	61.19	62.31
CDY34292	Canola	cytosol, plasma membrane, plastid	58.51	62.22
HORVU5Hr1G078950.1	Barley	cytosol	60.3	62.15
TraesCS5B01G300300.2	Wheat	cytosol	60.0	61.85
TraesCS5A01G300800.1	Wheat	cytosol	59.7	61.73
CDY03439	Canola	cytosol, plasma membrane, plastid	57.91	61.59
CDX89481	Canola	cytosol	57.91	61.2
CDY13754	Canola	cytosol	57.31	60.95
CDX76916	Canola	cytosol	57.31	60.95
CDX97871	Canola	cytosol	20.0	60.91
CDY25603	Canola	cytosol	57.61	60.88
TraesCS5A01G246300.1	Wheat	cytosol	57.01	59.13
TraesCS5B01G243600.1	Wheat	cytosol	57.01	59.13
TraesCS5D01G252800.1	Wheat	cytosol	57.01	59.13
CDY27701	Canola	cytosol	51.04	50.29
Os09t0465400-00	Rice	plastid	57.31	48.12
HORVU5Hr1G069700.1	Barley	plastid	57.01	47.04
CDY02849	Canola	plasma membrane	34.03	37.75
CDY32672	Canola	plasma membrane	34.03	37.75
CDX91242	Canola	extracellular	2.09	36.84
CDX88877	Canola	cytosol	32.84	36.79
CDX92503	Canola	cytosol	32.54	36.45
CDY44940	Canola	cytosol	32.54	36.45
CDY42293	Canola	cytosol	32.54	36.45
CDY35862	Canola	cytosol	32.54	36.45
CDX80317	Canola	endoplasmic reticulum, plasma membrane	32.84	36.07
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.54	35.74
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.54	35.74
CDY13183	Canola	plasma membrane	29.85	35.59
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.24	35.53
CDY51585	Canola	plasma membrane	32.24	35.53
CDX70888	Canola	cytosol, extracellular, plastid	25.97	34.12
CDX76170	Canola	cytosol, peroxisome, plastid	31.04	34.1
CDY33772	Canola	mitochondrion	31.34	34.09
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	29.25	31.21
CDY21942	Canola	plastid	29.25	31.11
CDY55007	Canola	cytosol, peroxisome, plasma membrane	33.73	30.96
CDX97299	Canola	extracellular	22.99	30.92
CDX91241	Canola	cytosol	26.27	30.34
CDX87281	Canola	cytosol, mitochondrion, plastid	21.79	23.4
CDY58780	Canola	cytosol, mitochondrion, plastid	21.49	23.08
CDX77693	Canola	cytosol, mitochondrion, plastid	20.6	23.0
CDY58507	Canola	cytosol, mitochondrion, plastid	20.6	23.0
CDX87675	Canola	cytosol, mitochondrion, plastid	20.3	22.82
CDY37683	Canola	cytosol, peroxisome, plastid	20.6	22.7
CDY03190	Canola	cytosol, mitochondrion, plastid	20.3	22.67
CDY37150	Canola	cytosol, mitochondrion, plastid	20.3	22.67
CDY35182	Canola	cytosol, mitochondrion, plastid	20.3	22.67
CDY57210	Canola	cytosol, peroxisome, plastid	20.3	22.37
CDY11206	Canola	cytosol	22.09	21.89
CDX80777	Canola	cytosol	22.09	18.23

Protein Annotations

EnsemblPlants:CDX81127	EnsemblPlantsGene:GSBRNA2T00134577001	Gene3D:1.50.40.10	GO:A0A078CWL3	GO:GO:0006810	GO:GO:0008150
GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	PFAM:PF00153	PFscan:PS50920	PRINTS:PR00926	ProteinID:CDX81127
ProteinID:CDX81127.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EE670A	MapMan:24.2.13	:

Description

BnaC03g03810D

Coordinates

chrLK031823:-:1849713..1851138

Molecular Weight (calculated)

35745.7 Da

IEP (calculated)

10.325

GRAVY (calculated)

0.175

Length

335 amino acids

Sequence
(BLAST)

001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNTNHNLDL NLPVKPYRPV FALDSLIGSI SLLPSSTPAP STSTRSSMTP FAVGAHIVKT
101: EGPAALFSGV SATVLRQMLY SATRMGIYDF LKRKWTDRLT GNFPLVTKIA AGLIAGAVGS AVGNPADVAM VRMQADGRLP LSRRRNYKSV VDAIERIVRH
201: EGVSSLWRGS WLTVNRAMIV TASQLATYDH VKEIMIAGGR GTPGGIGTHA AASFAAGIVA AVASNPIDVV KTRMMNAEAE SYGGPLDCAV KTVAEEGPMA
301: LYKGLVPTVT RQGPFTMILF VTLEQIRGLL KDVKF

Best Arabidopsis Sequence Match ( AT5G09470.1 )
(BLAST)

001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNPNPNLSL DHNLPVKPYR PVFALDSLIG SISLLPLHIH APSSSTRSVM TPFAVGAHIV
101: KTEGPAALFS GVSATILRQM LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS LPLNRRRNYK SVVDAIDRIA
201: RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP
301: MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF

Arabidopsis Description

PUMP6DIC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UKG1]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.