CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58507	Canola	cytosol, mitochondrion, plastid	99.0	99.0
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	98.67	98.67
CDX87675	Canola	cytosol, mitochondrion, plastid	91.67	92.28
CDY37150	Canola	cytosol, mitochondrion, plastid	91.67	91.67
CDY35182	Canola	cytosol, mitochondrion, plastid	91.0	91.0
CDY03190	Canola	cytosol, mitochondrion, plastid	90.67	90.67
AT5G46800.2	Thale cress	cytosol	90.33	90.33
KRH74426	Soybean	cytosol, mitochondrion, vacuole	76.67	77.44
KRH45454	Soybean	cytosol, mitochondrion, vacuole	76.0	76.77
KRH39532	Soybean	cytosol, mitochondrion, plastid	75.67	76.43
KRH75622	Soybean	cytosol, mitochondrion, vacuole	75.67	76.43
GSMUA_Achr5P13930_001	Banana	cytosol	75.33	76.35
Solyc10g079200.1.1	Tomato	plastid	74.67	75.42
GSMUA_Achr5P03430_001	Banana	cytosol, mitochondrion, plastid	73.33	74.32
Os10t0573700-01	Rice	mitochondrion	78.0	74.05
TraesCS1B01G206800.1	Wheat	cytosol, mitochondrion, plastid	76.67	73.48
Solyc06g061170.2.1	Tomato	plastid	56.0	73.36
TraesCS1D01G195500.1	Wheat	golgi	71.33	72.3
Os10t0573800-01	Rice	cytosol	71.33	72.3
TraesCS1B01G206900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	71.0	71.96
TraesCS1A01G191900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	71.0	71.96
GSMUA_Achr4P16910_001	Banana	cytosol, mitochondrion, plastid	72.0	71.76
EER91889	Sorghum	cytosol	70.67	71.62
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	78.0	68.42
PGSC0003DMT400019719	Potato	cytosol	19.33	67.44
TraesCS1D01G195400.1	Wheat	golgi	76.67	65.34
TraesCS1A01G191800.1	Wheat	endoplasmic reticulum, mitochondrion	76.67	59.43
HORVU1Hr1G050130.3	Barley	vacuole	47.33	43.96
CDX87281	Canola	cytosol, mitochondrion, plastid	33.67	32.37
CDY58780	Canola	cytosol, mitochondrion, plastid	33.67	32.37
CDY37683	Canola	cytosol, peroxisome, plastid	32.33	31.91
CDY57210	Canola	cytosol, peroxisome, plastid	32.0	31.58
CDY51585	Canola	plasma membrane	27.67	27.3
CDX67588	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.67	27.3
CDX78208	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.67	27.21
CDX73508	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.67	27.21
CDY13183	Canola	plasma membrane	25.0	26.69
CDX76170	Canola	cytosol, peroxisome, plastid	26.33	25.9
CDY32672	Canola	plasma membrane	26.0	25.83
CDY02849	Canola	plasma membrane	26.0	25.83
CDX80317	Canola	endoplasmic reticulum, plasma membrane	25.67	25.25
CDY33772	Canola	mitochondrion	25.33	24.68
CDX97871	Canola	cytosol	8.33	22.73
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	23.67	22.61
CDX97299	Canola	extracellular	18.67	22.49
CDX91241	Canola	cytosol	21.67	22.41
CDY21942	Canola	plastid	23.0	21.9
CDX88877	Canola	cytosol	21.67	21.74
CDY11206	Canola	cytosol	24.33	21.6
CDY42293	Canola	cytosol	21.33	21.4
CDX92503	Canola	cytosol	21.33	21.4
CDY35862	Canola	cytosol	21.33	21.4
CDY44940	Canola	cytosol	21.33	21.4
CDY55007	Canola	cytosol, peroxisome, plasma membrane	26.0	21.37
CDY03439	Canola	cytosol, plasma membrane, plastid	22.33	21.27
CDY34292	Canola	cytosol, plasma membrane, plastid	22.33	21.27
CDX91242	Canola	extracellular	1.33	21.05
CDY13754	Canola	cytosol	21.67	20.63
CDY67400	Canola	plasma membrane	23.0	20.6
CDX81127	Canola	plasma membrane	23.0	20.6
CDY25603	Canola	cytosol	21.67	20.5
CDX89481	Canola	cytosol	21.67	20.5
CDX76916	Canola	cytosol	21.33	20.32
CDX80777	Canola	cytosol	25.0	18.47
CDX70888	Canola	cytosol, extracellular, plastid	15.67	18.43
CDY27701	Canola	cytosol	20.0	17.65

Protein Annotations

EnsemblPlants:CDX77693	EnsemblPlantsGene:GSBRNA2T00128666001	Gene3D:1.50.40.10	GO:A0A078CRD3	InterPro:IPR018108	InterPro:IPR023395
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089	PANTHER:PTHR24089:SF640	PFAM:PF00153	PFscan:PS50920
ProteinID:CDX77693	ProteinID:CDX77693.1	SEG:seg	SUPFAM:SSF103506	UniParc:UPI0004EAFF0F	MapMan:24.2.13

Description

BnaC07g19470D

Coordinates

chrLK031812:-:963960..965723

Molecular Weight (calculated)

31088.7 Da

IEP (calculated)

10.079

GRAVY (calculated)

0.171

Length

300 amino acids

Sequence
(BLAST)

001: MADAAKDLAS GTVGGAAQII VGHPFDTIKV KLQSQPAPTP GRPPRYAGAF DAVRQTVAAE GPKGLYKGMG APLATVAALN AVLFTVRGQM EGLLRSDLGV
101: PLTISQQFVC GSGAGFAVSF LACPTELVKC RLQAHGALAC ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREIPGNAT MFATYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPADVVKSV LQVDDYKNPK YRGSMDAFRK ILKAEGVKGL YKGFGPAMGR SVFANAACFL AYEKTRSSLG

Best Arabidopsis Sequence Match ( AT5G46800.1 )
(BLAST)

001: MADAWKDLAS GTVGGAAQLV VGHPFDTIKV KLQSQPTPAP GQLPRYTGAI DAVKQTVASE GTKGLYKGMG APLATVAAFN AVLFTVRGQM EGLLRSEAGV
101: PLTISQQFVA GAGAGFAVSF LACPTELIKC RLQAQGALAG ASTTSSVVAA VKYGGPMDVA RHVLRSEGGA RGLFKGLFPT FAREVPGNAT MFAAYEAFKR
201: FLAGGSDTSS LGQGSLIMAG GVAGASFWGI VYPTDVVKSV LQVDDYKNPR YTGSMDAFRK ILKSEGVKGL YKGFGPAMAR SVPANAACFL AYEMTRSSLG

Arabidopsis Description

BOUMitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.