Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G252800.1 | Wheat | cytosol | 99.69 | 99.69 |
| TraesCS5B01G243600.1 | Wheat | cytosol | 99.07 | 99.07 |
| Zm00001d031833_P001 | Maize | mitochondrion | 79.88 | 79.14 |
| HORVU5Hr1G069700.1 | Barley | plastid | 98.45 | 78.33 |
| EES15143 | Sorghum | cytosol | 78.33 | 76.9 |
| VIT_00s0407g00020.t01 | Wine grape | mitochondrion | 33.44 | 76.6 |
| TraesCS5A01G300800.1 | Wheat | cytosol | 75.85 | 75.62 |
| KRH52898 | Soybean | cytosol | 31.58 | 75.0 |
| GSMUA_Achr5P17950_001 | Banana | cytosol | 63.78 | 74.64 |
| KRH69658 | Soybean | cytosol | 68.42 | 69.72 |
| KRH62186 | Soybean | cytosol | 64.71 | 69.67 |
| VIT_00s2349g00010.t01 | Wine grape | cytosol | 67.49 | 68.55 |
| KRH45564 | Soybean | cytosol | 66.56 | 68.47 |
| KRH74503 | Soybean | cytosol | 67.18 | 68.45 |
| VIT_18s0001g07320.t01 | Wine grape | cytosol | 67.49 | 67.49 |
| Solyc05g051400.2.1 | Tomato | plastid | 62.23 | 66.78 |
| CDY25603 | Canola | cytosol | 65.33 | 66.56 |
| CDX89481 | Canola | cytosol | 65.33 | 66.56 |
| CDX76916 | Canola | cytosol | 64.71 | 66.35 |
| PGSC0003DMT400037834 | Potato | cytosol | 65.02 | 66.25 |
| AT2G22500.1 | Thale cress | cytosol | 64.09 | 66.13 |
| CDY34292 | Canola | cytosol, plasma membrane, plastid | 64.09 | 65.71 |
| CDY13754 | Canola | cytosol | 64.09 | 65.71 |
| CDY03439 | Canola | cytosol, plasma membrane, plastid | 64.09 | 65.71 |
| Bra013815.1-P | Field mustard | cytosol, plasma membrane, plastid | 64.09 | 65.71 |
| Bra038517.1-P | Field mustard | cytosol | 64.09 | 65.71 |
| AT4G24570.1 | Thale cress | cytosol | 63.47 | 65.5 |
| Solyc11g010500.1.1 | Tomato | cytosol | 65.63 | 65.43 |
| PGSC0003DMT400041633 | Potato | cytosol | 65.63 | 65.43 |
| Bra030231.1-P | Field mustard | cytosol | 64.09 | 65.3 |
| Os09t0465400-00 | Rice | plastid | 78.33 | 63.41 |
| CDX97871 | Canola | cytosol | 20.43 | 60.0 |
| CDY67400 | Canola | plasma membrane | 59.13 | 57.01 |
| CDX81127 | Canola | plasma membrane | 59.13 | 57.01 |
| Bra006022.1-P | Field mustard | plasma membrane | 58.82 | 56.72 |
| AT5G09470.1 | Thale cress | extracellular, plasma membrane | 59.13 | 56.68 |
| CDY27701 | Canola | cytosol | 57.28 | 54.41 |
| TraesCS4A01G179400.1 | Wheat | cytosol | 34.98 | 37.17 |
| TraesCS1A01G124600.1 | Wheat | golgi, unclear | 34.67 | 37.09 |
| TraesCS3A01G135800.1 | Wheat | cytosol | 34.67 | 36.6 |
| TraesCS3A01G199800.1 | Wheat | plasma membrane | 31.89 | 36.01 |
| TraesCS2A01G317100.1 | Wheat | cytosol, mitochondrion, plastid | 31.27 | 31.46 |
| TraesCS1A01G191900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 22.91 | 25.0 |
| TraesCS3A01G149900.1 | Wheat | cytosol | 23.84 | 23.77 |
| TraesCS5A01G096600.1 | Wheat | mitochondrion, plastid | 21.98 | 23.43 |
| TraesCS4A01G407600.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 21.05 | 22.22 |
| TraesCS4A01G110200.1 | Wheat | plastid | 21.36 | 21.3 |
| TraesCS1A01G191800.1 | Wheat | endoplasmic reticulum, mitochondrion | 23.84 | 19.9 |
Protein Annotations
| Gene3D:1.50.40.10 | MapMan:24.2.13 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006810 | GO:GO:0006839 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0031966 |
| InterPro:IPR018108 | InterPro:IPR023395 | InterPro:Mit_uncoupling_UCP-like | InterPro:Mitochondrial_sb/sol_carrier | InterPro:Mt_carrier_dom_sf | PFAM:PF00153 |
| PRINTS:PR00784 | PFscan:PS50920 | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF616 | SUPFAM:SSF103506 | EnsemblPlantsGene:TraesCS5A01G246300 |
| EnsemblPlants:TraesCS5A01G246300.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:459676113..459677084
Molecular Weight (calculated)
34120.6 Da
IEP (calculated)
11.008
GRAVY (calculated)
0.042
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKGFVEGG AASVVAGCST HPLDLIKVRM QLQGEAARAP APAMRFALVF PPGVQHHHHH DHLLQPPRRP GPIAIGAQIL RAEGPAGLLS GVSATVLRQA
101: VYSSTSMGLY DTIKRRWERE SGGAALPLHR KIAAGLVAGG VGATVGNPAD VAMVRMQADG RLPAAERRNY RSVAHAIGRI ARDEGVRRLW RGSSLTVNRA
201: MIVTASQLAT YDQAKEAILS RRGPGGDGLA THVAASFTAG LVAAAASSPV DVVKTRIMNM KVEPGAPPPY AGAIDCAIKT VRSEGALALY KGFIPTVTRQ
301: GPFTVVLFVT LEQVRKLLKD FDF
101: VYSSTSMGLY DTIKRRWERE SGGAALPLHR KIAAGLVAGG VGATVGNPAD VAMVRMQADG RLPAAERRNY RSVAHAIGRI ARDEGVRRLW RGSSLTVNRA
201: MIVTASQLAT YDQAKEAILS RRGPGGDGLA THVAASFTAG LVAAAASSPV DVVKTRIMNM KVEPGAPPPY AGAIDCAIKT VRSEGALALY KGFIPTVTRQ
301: GPFTVVLFVT LEQVRKLLKD FDF
001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNPNPNLSL DHNLPVKPYR PVFALDSLIG SISLLPLHIH APSSSTRSVM TPFAVGAHIV
101: KTEGPAALFS GVSATILRQM LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS LPLNRRRNYK SVVDAIDRIA
201: RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP
301: MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF
101: KTEGPAALFS GVSATILRQM LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS LPLNRRRNYK SVVDAIDRIA
201: RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP
301: MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF
Arabidopsis Description
PUMP6DIC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UKG1]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.