CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0407g00020.t01	Wine grape	mitochondrion	40.45	90.07
KRH69658	Soybean	cytosol	84.39	83.6
KRH52898	Soybean	cytosol	35.67	82.35
KRH74503	Soybean	cytosol	83.12	82.33
VIT_00s2349g00010.t01	Wine grape	cytosol	83.12	82.08
GSMUA_Achr10P...	Banana	mitochondrion	37.9	80.95
Solyc05g051400.2.1	Tomato	plastid	77.07	80.4
PGSC0003DMT400037834	Potato	cytosol	80.25	79.5
Solyc11g010500.1.1	Tomato	cytosol	81.21	78.7
PGSC0003DMT400041633	Potato	cytosol	80.89	78.4
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	15.29	77.42
KRH62186	Soybean	cytosol	73.25	76.67
GSMUA_Achr3P06760_001	Banana	cytosol	64.33	74.54
GSMUA_Achr5P17950_001	Banana	cytosol	63.38	72.1
TraesCS5D01G307000.1	Wheat	cytosol	72.61	70.81
TraesCS5A01G300800.1	Wheat	cytosol	72.93	70.68
HORVU5Hr1G078950.1	Barley	cytosol	72.93	70.46
TraesCS5B01G300300.2	Wheat	cytosol	72.93	70.46
EES15143	Sorghum	cytosol	72.93	69.6
Zm00001d031833_P001	Maize	mitochondrion	71.97	69.33
TraesCS5D01G252800.1	Wheat	cytosol	68.79	66.87
TraesCS5B01G243600.1	Wheat	cytosol	68.79	66.87
TraesCS5A01G246300.1	Wheat	cytosol	68.47	66.56
HORVU5Hr1G069700.1	Barley	plastid	69.11	53.45
Os09t0465400-00	Rice	plastid	66.56	52.38
KRH58947	Soybean	cytosol	26.43	39.34
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	36.94	38.54
KRH66001	Soybean	mitochondrion	33.76	34.75
KRH49267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.44	34.43
KRH75799	Soybean	plastid	33.44	34.43
KRG98352	Soybean	plasma membrane, vacuole	32.17	34.01
KRH34619	Soybean	cytosol	32.48	33.44
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	32.17	33.11
KRH00136	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.08	32.33
KRH46454	Soybean	endoplasmic reticulum, plasma membrane, vacuole	26.43	30.97
KRH71523	Soybean	plastid	30.25	29.97
KRH23460	Soybean	cytosol, mitochondrion, plastid	22.93	24.41
KRH09864	Soybean	cytosol, mitochondrion, plastid	22.29	23.81
KRH16814	Soybean	cytosol	23.57	23.42
KRH75622	Soybean	cytosol, mitochondrion, vacuole	21.02	22.22
KRH39532	Soybean	cytosol, mitochondrion, plastid	21.02	22.22
KRH72424	Soybean	cytosol	23.89	21.93
KRH74426	Soybean	cytosol, mitochondrion, vacuole	20.7	21.89
KRH45454	Soybean	cytosol, mitochondrion, vacuole	20.7	21.89
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	19.11	21.82
KRH47042	Soybean	cytosol, mitochondrion, plastid	21.02	21.78
KRH44361	Soybean	cytosol, mitochondrion, plastid	20.7	21.45
KRH62946	Soybean	extracellular	7.32	21.3
KRH50090	Soybean	cytosol	20.38	20.98
KRH70113	Soybean	mitochondrion	8.6	19.71
KRH65469	Soybean	extracellular	7.64	19.05

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100797888	MapMan:24.2.13	EMBL:ACUP02005261	EnsemblPlantsGene:GLYMA_08G280300	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0008272	GO:GO:0015116
GO:GO:0015117	GO:GO:0015131	GO:GO:0015140	GO:GO:0015141	GO:GO:0015297	GO:GO:0015709
GO:GO:0015729	GO:GO:0016020	GO:GO:0016021	GO:GO:0035435	GO:GO:0055085	GO:GO:0071422
GO:GO:0071423	GO:GO:1901677	GO:GO:1902356	GO:GO:1902358	UniProt:I1KX90	InterPro:IPR018108
InterPro:IPR023395	EnsemblPlants:KRH45564	ProteinID:KRH45564	ProteinID:KRH45564.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616
SUPFAM:SSF103506	UniParc:UPI0002338586	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:37970246..37972217

Molecular Weight (calculated)

33464.1 Da

IEP (calculated)

10.518

GRAVY (calculated)

0.078

Length

314 amino acids

Sequence
(BLAST)

001: MGVKGFVEGG IASVIAGCST HPLDLIKVRM QLQGETQQPS NLRPALAFHP SSVHAPPQPA AKEGPIAVGV KLVQQEGVAA LFSGVSATVL RQLLYSTTRM
101: GLYEVLKKKW SDPNSAGGTL SLSRKITAGL ISGGIGAVVG NPADVAMVRM QADGRLPPIR QRNYKSVLDA IARMTKDEGI TSLWRGSSLT VNRAMLVTAS
201: QLASYDQFKE MILEKGVMRD GLGTHVTSSF AAGFVAAVTS NPVDVIKTRV MNMKVEPGAA PPYSGALDCA LKTVRKEGPM ALYKGFIPTI SRQGPFTVVL
301: FVTLEQVRKL LKDF

Best Arabidopsis Sequence Match ( AT4G24570.1 )
(BLAST)

001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF

Arabidopsis Description

PUMP4DIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178URN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.