CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	30.15	66.13
GSMUA_Achr10P...	Banana	mitochondrion	68.38	63.27
KRH62186	Soybean	cytosol	94.12	42.67
KRH69658	Soybean	cytosol	86.76	37.22
KRH74503	Soybean	cytosol	86.76	37.22
VIT_18s0001g07320.t01	Wine grape	cytosol	85.29	35.91
KRH45564	Soybean	cytosol	82.35	35.67
AT4G24570.1	Thale cress	cytosol	79.41	34.5
CDY34292	Canola	cytosol, plasma membrane, plastid	78.68	33.97
CDY03439	Canola	cytosol, plasma membrane, plastid	78.68	33.97
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	78.68	33.97
GSMUA_Achr3P06760_001	Banana	cytosol	66.91	33.58
GSMUA_Achr5P17950_001	Banana	cytosol	67.65	33.33
TraesCS5D01G307000.1	Wheat	cytosol	77.94	32.92
TraesCS5A01G300800.1	Wheat	cytosol	77.94	32.72
HORVU5Hr1G078950.1	Barley	cytosol	77.94	32.62
TraesCS5B01G300300.2	Wheat	cytosol	77.94	32.62
TraesCS5B01G243600.1	Wheat	cytosol	75.74	31.89
TraesCS5D01G252800.1	Wheat	cytosol	75.0	31.58
TraesCS5A01G246300.1	Wheat	cytosol	75.0	31.58
Zm00001d031833_P001	Maize	mitochondrion	74.26	30.98
EES15143	Sorghum	cytosol	74.26	30.7
HORVU5Hr1G069700.1	Barley	plastid	75.74	25.37
Os09t0465400-00	Rice	plastid	71.32	24.31
KRH49267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.65	19.02
KRH66001	Soybean	mitochondrion	42.65	19.02
KRH75799	Soybean	plastid	42.65	19.02
KRG98352	Soybean	plasma membrane, vacuole	40.44	18.52
KRH00136	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	43.38	17.82
KRH62946	Soybean	extracellular	13.97	17.59
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	38.97	17.38
KRH34619	Soybean	cytosol	38.97	17.38
KRH65469	Soybean	extracellular	15.44	16.67
KRH42853	Soybean	endoplasmic reticulum, mitochondrion, nucleus	36.76	16.61
KRH71523	Soybean	plastid	35.29	15.14
KRH46454	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.21	13.81
KRH09864	Soybean	cytosol, mitochondrion, plastid	27.94	12.93
KRH23460	Soybean	cytosol, mitochondrion, plastid	27.94	12.88
KRH44361	Soybean	cytosol, mitochondrion, plastid	28.68	12.87
KRH45454	Soybean	cytosol, mitochondrion, vacuole	26.47	12.12
KRH47042	Soybean	cytosol, mitochondrion, plastid	26.47	11.88
KRH75622	Soybean	cytosol, mitochondrion, vacuole	25.74	11.78
KRH74426	Soybean	cytosol, mitochondrion, vacuole	25.0	11.45
KRH39532	Soybean	cytosol, mitochondrion, plastid	25.0	11.45
KRH16814	Soybean	cytosol	25.0	10.76
KRH20413	Soybean	cytosol, endoplasmic reticulum, peroxisome	20.59	10.18
KRH72424	Soybean	cytosol	25.0	9.94
KRH50090	Soybean	cytosol	20.59	9.18
KRH58947	Soybean	cytosol	12.5	8.06
KRH70113	Soybean	mitochondrion	2.21	2.19

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EMBL:ACUP02003441	EnsemblPlantsGene:GLYMA_06G093900	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0008272	GO:GO:0015116	GO:GO:0015117
GO:GO:0015131	GO:GO:0015140	GO:GO:0015141	GO:GO:0015297	GO:GO:0015709	GO:GO:0015729
GO:GO:0016020	GO:GO:0016021	GO:GO:0031966	GO:GO:0035435	GO:GO:0071422	GO:GO:0071423
GO:GO:1901677	GO:GO:1902356	GO:GO:1902358	InterPro:IPR018108	InterPro:IPR023395	UniProt:K7KU53
EnsemblPlants:KRH52898	ProteinID:KRH52898	ProteinID:KRH52898.1	InterPro:Mit_uncoupling_UCP-like	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf
PFAM:PF00153	PRINTS:PR00784	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF616	SUPFAM:SSF103506
UniParc:UPI0002959AEC	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:7392441..7393556

Molecular Weight (calculated)

14684.9 Da

IEP (calculated)

9.131

GRAVY (calculated)

0.276

Length

136 amino acids

Sequence
(BLAST)

001: MSNQEVVGSL WRGSVLTVNR AMIVTASQLA SYDQFKETIL GRGLMEDGLG THVAASFAAG FVASVASNPI DVIKTRVMNM NAEAYNGALD CALKTVRAEG
101: PLALYKGFIP TISRQGPFTV VLFVTLEQVR KLLKDF

Best Arabidopsis Sequence Match ( AT4G24570.1 )
(BLAST)

001: MGVKSFVEGG IASVIAGCST HPLDLIKVRL QLHGEAPSTT TVTLLRPALA FPNSSPAAFL ETTSSVPKVG PISLGINIVK SEGAAALFSG VSATLLRQTL
101: YSTTRMGLYE VLKNKWTDPE SGKLNLSRKI GAGLVAGGIG AAVGNPADVA MVRMQADGRL PLAQRRNYAG VGDAIRSMVK GEGVTSLWRG SALTINRAMI
201: VTAAQLASYD QFKEGILENG VMNDGLGTHV VASFAAGFVA SVASNPVDVI KTRVMNMKVG AYDGAWDCAV KTVKAEGAMA LYKGFVPTVC RQGPFTVVLF
301: VTLEQVRKLL RDF

Arabidopsis Description

PUMP4DIC2 [Source:UniProtKB/TrEMBL;Acc:A0A178URN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.