Factsheet for Bra005690.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11206	Canola	cytosol	83.13	99.11
AT5G01340.1	Thale cress	cytosol, mitochondrion, plastid	71.22	92.88
GSMUA_Achr7P15600_001	Banana	mitochondrion	38.96	82.63
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	62.53	82.35
KRH16814	Soybean	cytosol	62.03	79.11
GSMUA_Achr10P...	Banana	cytosol	43.18	77.68
Os03t0292200-01	Rice	peroxisome	61.04	77.6
TraesCS4B01G193900.1	Wheat	plastid	60.79	75.62
TraesCS4A01G110200.1	Wheat	plastid	60.79	75.62
TraesCS4D01G194800.1	Wheat	plastid	61.04	75.46
EER95032	Sorghum	plastid	60.05	72.67
KRH72424	Soybean	cytosol	61.29	72.22
PGSC0003DMT400028643	Potato	cytosol, mitochondrion, nucleus	61.54	71.68
HORVU4Hr1G056100.1	Barley	mitochondrion	60.55	69.32
Zm00001d028753_P003	Maize	plastid	60.05	66.12
Bra038517.1-P	Field mustard	cytosol	20.35	26.03
Bra022065.1-P	Field mustard	cytosol, mitochondrion, plastid	19.11	25.84
Bra017524.1-P	Field mustard	cytosol, mitochondrion, plastid	19.11	25.67
Bra018517.1-P	Field mustard	cytosol	15.63	25.51
Bra030231.1-P	Field mustard	cytosol	19.85	25.24
Bra034186.1-P	Field mustard	plastid	19.35	24.84
Bra013815.1-P	Field mustard	cytosol, plasma membrane, plastid	19.35	24.76
Bra024994.1-P	Field mustard	cytosol, mitochondrion, plastid	18.11	24.33
Bra035205.1-P	Field mustard	cytosol, mitochondrion, plastid	18.61	24.04
Bra003170.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	17.87	23.68
Bra007046.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	17.87	23.61
Bra006516.1-P	Field mustard	cytosol	17.37	23.41
Bra002259.1-P	Field mustard	cytosol	14.89	23.17
Bra014840.1-P	Field mustard	cytosol, peroxisome, plastid	17.37	22.95
Bra020060.1-P	Field mustard	cytosol	16.87	22.74
Bra006022.1-P	Field mustard	plasma membrane	18.11	21.79
Bra026855.1-P	Field mustard	mitochondrion	16.63	21.75
Bra021881.1-P	Field mustard	cytosol, peroxisome, plastid	16.38	21.71
Bra020342.1-P	Field mustard	plasma membrane	15.88	21.19
Bra002603.1-P	Field mustard	cytosol	15.38	19.02

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	EnsemblPlantsGene:Bra005690	EnsemblPlants:Bra005690.1	EnsemblPlants:Bra005690.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015141
GO:GO:0015744	GO:GO:0016020	GO:GO:0016021	GO:GO:0071422	InterPro:IPR018108	InterPro:IPR023395
UniProt:M4CNA2	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089
PANTHER:PTHR24089:SF396	SUPFAM:SSF103506	UniParc:UPI000253FA2A	:	:	:

Description

AT5G01340 (E=5e-167) | mitochondrial substrate carrier family protein

Coordinates

chrA03:+:138959..142011

Molecular Weight (calculated)

43919.4 Da

IEP (calculated)

10.044

GRAVY (calculated)

-0.117

Length

403 amino acids

Sequence
(BLAST)

001: MAGGGNFIGR VISYVANELI VNGLSNSHAF QRFAVRTSKR IENISKMAAE SKEKVAQHME ELSKNSDITN KIKEEPVTAE ARRGAEDLVE MSSSAKTDSK
101: SQASIPPYMK AISGSLGGVV EACCLQPIDV IKTRLQLDRG GAYKGIAHCG STVVRTEGVR ALWKGLTPFA THLTLKYTLR MGSNAMFQTV FKDSETGKVS
201: NHGRLLSGFG AGVLEALAIV TPFEVVKIRL QQQKGLSPEL FKYKGPIHCA RTIVREESIL GLWSGAAPTV MRNGTNQAVM FTAKNSFDVL LWNKHEGDGQ
301: ALQPWQSMIS GFLAGTAGPF CTGPFDVVKT RLMAQTRDGE GGLKYKGMVH AIRTIYAEEG LVALWRGLLP RLMRIPPGQA IMWAVADQVT GLYEKRYLLN
401: APL

Best Arabidopsis Sequence Match ( AT5G01340.1 )
(BLAST)

001: MATRTESKKQ IPPYMKAVSG SLGGVVEACC LQPIDVIKTR LQLDRVGAYK GIAHCGSKVV RTEGVRALWK GLTPFATHLT LKYTLRMGSN AMFQTAFKDS
101: ETGKVSNRGR FLSGFGAGVL EALAIVTPFE VVKIRLQQQK GLSPELFKYK GPIHCARTIV REESILGLWS GAAPTVMRNG TNQAVMFTAK NAFDILLWNK
201: HEGDGKILQP WQSMISGFLA GTAGPFCTGP FDVVKTRLMA QSRDSEGGIR YKGMVHAIRT IYAEEGLVAL WRGLLPRLMR IPPGQAIMWA VADQVTGLYE
301: MRYLRNAPL

Arabidopsis Description

SFC1Mitochondrial succinate-fumarate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M038]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.