Factsheet for HORVU5Hr1G026160.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G109300.2	Wheat	plastid	96.35	97.64
KXG23597	Sorghum	mitochondrion	82.39	83.22
Zm00001d023895_P007	Maize	mitochondrion	80.07	80.87
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	57.14	74.46
VIT_07s0104g01160.t01	Wine grape	cytosol	68.77	66.56
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	63.12	62.71
TraesCS5B01G102500.1	Wheat	mitochondrion	62.79	62.17
GSMUA_Achr1P14700_001	Banana	cytosol	71.43	61.96
Solyc09g074370.2.1	Tomato	cytosol	58.47	61.75
KRH71523	Soybean	plastid	63.46	60.25
Bra034186.1-P	Field mustard	plastid	62.46	59.87
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	62.13	59.55
CDY21942	Canola	plastid	61.13	58.41
CDX91242	Canola	extracellular	3.65	57.89
AT4G03115.3	Thale cress	cytosol	61.46	53.47
CDX91241	Canola	cytosol	51.49	53.45
Bra018517.1-P	Field mustard	cytosol	43.85	53.44
CDX97299	Canola	extracellular	44.19	53.41
PGSC0003DMT400043390	Potato	cytosol, plastid	65.12	47.0
HORVU5Hr1G078970.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	6.31	30.65
HORVU3Hr1G043380.11	Barley	plasma membrane, vacuole	28.9	30.21
HORVU5Hr1G078950.1	Barley	cytosol	30.9	28.62
HORVU1Hr1G028720.1	Barley	cytosol, extracellular, peroxisome	24.58	24.5
HORVU5Hr1G069700.1	Barley	plastid	32.23	23.89
HORVU4Hr1G027150.1	Barley	cytosol, plasma membrane, plastid	31.23	23.5
HORVU3Hr1G025820.1	Barley	plasma membrane	23.59	23.2
HORVU4Hr1G056100.1	Barley	mitochondrion	25.25	21.59
HORVU4Hr1G078670.2	Barley	cytosol, mitochondrion, plasma membrane	20.93	20.59
HORVU1Hr1G050130.3	Barley	vacuole	16.61	15.48

Protein Annotations

EMBL:AK370307	EnsemblPlants:HORVU5Hr1G026160.2	EnsemblPlantsGene:HORVU5Hr1G026160	Gene3D:1.50.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR018108	InterPro:IPR023395	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PANTHER:PTHR24089
PANTHER:PTHR24089:SF664	PFAM:PF00153	PFscan:PS50920	SEG:seg	SUPFAM:SSF103506	UniParc:UPI000200795E
UniProt:F2E2D6	MapMan:24.2.13	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E2D6]

Coordinates

chrchr5H:-:146522429..146526329

Molecular Weight (calculated)

32185.7 Da

IEP (calculated)

9.983

GRAVY (calculated)

0.219

Length

301 amino acids

Sequence
(BLAST)

001: MASPMSGDAR TPPRGAAPYA LYQFGTSGAA VAVATAATHP LDVIKIRLQM QLAGQRGNLV GMGAIFKQMV EREGPRSLYL GFAPALTRSL IYGGLRLGLY
101: EPCKHVCSYA FGSTNFAFKF ASGVVAGALA TALTNPMEVL KVRSQMSTSR ISTIGVMKEI VSEEGVKALW KGVGPAMVRA GCLTASQMAT YDEAKQVLLM
201: WTPFEEGFQL HLMSSCIAGT AGTLVTAPID MIKTRLMLQR ESKGARVYRN GFHCAYQVVL TEGVKSLYKG GFATFARLGP QTAITFVACE KLRELAGMSA
301: I

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.