Factsheet for VIT_07s0104g01160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71523	Soybean	plastid	72.35	70.98
TraesCS5D01G109300.2	Wheat	plastid	67.2	70.37
KXG23597	Sorghum	mitochondrion	66.56	69.46
HORVU5Hr1G026160.2	Barley	mitochondrion, plastid	66.56	68.77
Solyc09g074370.2.1	Tomato	cytosol	62.38	68.07
Zm00001d023895_P007	Maize	mitochondrion	64.95	67.79
Bra034186.1-P	Field mustard	plastid	67.52	66.88
CDY22103	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	67.2	66.56
CDY21942	Canola	plastid	65.59	64.76
CDX91242	Canola	extracellular	3.86	63.16
Os12t0533800-01	Rice	endoplasmic reticulum, extracellular	45.02	60.61
AT4G03115.3	Thale cress	cytosol	67.2	60.4
Bra018517.1-P	Field mustard	cytosol	46.95	59.11
CDX97299	Canola	extracellular	47.27	59.04
CDX91241	Canola	cytosol	54.98	58.97
GSMUA_Achr1P14700_001	Banana	cytosol	64.95	58.21
PGSC0003DMT400043390	Potato	cytosol, plastid	69.13	51.56
TraesCS5A01G096600.1	Wheat	mitochondrion, plastid	45.98	47.19
TraesCS5B01G102500.1	Wheat	mitochondrion	45.98	47.04
VIT_00s0407g00020.t01	Wine grape	mitochondrion	15.76	34.75
VIT_06s0004g05940.t01	Wine grape	plasma membrane, vacuole	31.83	32.78
VIT_01s0026g02750.t01	Wine grape	cytosol	28.62	31.79
VIT_08s0007g01700.t01	Wine grape	extracellular	29.58	30.26
VIT_18s0001g07320.t01	Wine grape	cytosol	30.87	29.72
VIT_00s2349g00010.t01	Wine grape	cytosol	29.9	29.25
VIT_08s0007g07270.t01	Wine grape	cytosol, peroxisome, plastid	25.08	26.17
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	25.4	25.82
VIT_09s0002g04500.t01	Wine grape	cytosol, mitochondrion, plastid	21.54	21.54
VIT_06s0004g00470.t01	Wine grape	cytosol	23.79	21.45
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	18.97	19.47
VIT_16s0039g00630.t01	Wine grape	cytosol	8.36	19.26
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	20.58	18.71
VIT_00s0827g00030.t01	Wine grape	extracellular	5.47	17.71

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100252712	wikigene:100252712	MapMan:24.2.13	ProteinID:CBI32275	ProteinID:CBI32275.3
UniProt:D7TP52	EMBL:FN596005	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006810	GO:GO:0006839
GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0017077	GO:GO:1902600
GO:GO:1990542	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100252712	wikigene:LOC100252712	InterPro:Mitochondrial_sb/sol_carrier
InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF664	SUPFAM:SSF103506
UniParc:UPI0001BE3F69	ArrayExpress:VIT_07s0104g01160	EnsemblPlantsGene:VIT_07s0104g01160	EnsemblPlants:VIT_07s0104g01160.t01	RefSeq:XP_002270442	RefSeq:XP_002270442.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:2216262..2220690

Molecular Weight (calculated)

33687.7 Da

IEP (calculated)

10.463

GRAVY (calculated)

0.097

Length

311 amino acids

Sequence
(BLAST)

001: MESGSEKSSL SGSMKENKSR NWALSPSNAV YHFGASGISV ATATAITHPL DVLKVRLQMQ LVGGRGPLNG MGRIFVEVVK KEGPKSLYLG LMPALTRSVL
101: YGGLRLGLYE PSKYVCKWAF GSTNLLLKIA SGVFSGALAT ALTNPMEVLK VRLQMKSNLR RGAIGEMCKI ISEEGIKALW KGVGPAMVRA GALTASQLAT
201: YDETKQILMR WTPLEEGFHL HLISSTVAGG LSTLITAPMD MIKTRLMLQR ESKVAGNYKN GFHCAYQVIL TEGPRALYKG GFATFARLGP QTTITFILLE
301: KLREFAGLNA I

Best Arabidopsis Sequence Match ( AT4G03115.1 )
(BLAST)

001: MIGDISPPVT SIPVVEGNEE LRKPQNLIPP FSKVVSHFGI SGISVALATG VTHPLDVVKV RLQMQHVGQR GPLIGMTGIF LQLMKNEGRR SLYLGLTPAL
101: TRSVLYGGLR LGLYEPTKVS FDWAFGSTNV LVKIASGAFA GAFSTALTNP VEVVKVRLQM NPNAVPIAEV REIVSKEGIG ALWKGVGPAM VRAAALTASQ
201: LATYDEAKRI LVKRTSLEEG FHLHLCSSVV AGLVSTLITA PMDMIKTRLM LQQGSESTKT YRNGFHCGYK VVRKEGPLAL YKGGFAIFAR LGPQTMITFI
301: LCEKLRSLAG LHTM

Arabidopsis Description

Mitochondrial substrate carrier family protein [Source:TAIR;Acc:AT4G03115]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.