Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0039g00630.t01 | Wine grape | cytosol | 85.42 | 60.74 |
| KRH58947 | Soybean | cytosol | 64.58 | 29.38 |
| VIT_08s0007g07270.t01 | Wine grape | cytosol, peroxisome, plastid | 70.83 | 22.82 |
| VIT_06s0004g00470.t01 | Wine grape | cytosol | 64.58 | 17.97 |
| Zm00001d010020_P001 | Maize | mitochondrion | 19.79 | 14.07 |
| VIT_01s0026g02750.t01 | Wine grape | cytosol | 27.08 | 9.29 |
| VIT_00s2349g00010.t01 | Wine grape | cytosol | 30.21 | 9.12 |
| VIT_06s0004g05940.t01 | Wine grape | plasma membrane, vacuole | 28.12 | 8.94 |
| VIT_18s0001g07320.t01 | Wine grape | cytosol | 28.12 | 8.36 |
| VIT_08s0007g01700.t01 | Wine grape | extracellular | 22.92 | 7.24 |
| VIT_08s0217g00010.t01 | Wine grape | cytosol, mitochondrion, nucleus | 17.71 | 5.56 |
| VIT_07s0104g01160.t01 | Wine grape | cytosol | 17.71 | 5.47 |
| VIT_09s0002g04500.t01 | Wine grape | cytosol, mitochondrion, plastid | 16.67 | 5.14 |
| VIT_10s0003g00060.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion | 12.5 | 3.96 |
| VIT_02s0012g01250.t01 | Wine grape | mitochondrion, plastid | 12.5 | 3.51 |
| VIT_00s0407g00020.t01 | Wine grape | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_00s0827g00030 | EMBL:FN595013 | EnsemblPlants:VIT_00s0827g00030.t01 | EnsemblPlantsGene:VIT_00s0827g00030 | Gene3D:1.50.40.10 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR023395 | InterPro:Mt_carrier_dom_sf | PANTHER:PTHR24089 | PANTHER:PTHR24089:SF427 |
| ProteinID:CCB45307 | ProteinID:CCB45307.1 | SEG:seg | SUPFAM:SSF103506 | UniParc:UPI00021089A4 | UniProt:F6GZC1 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:35818278..35820809
Molecular Weight (calculated)
10423.9 Da
IEP (calculated)
9.947
GRAVY (calculated)
0.169
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MHDIIKFLEF YILKATYTTA RLGSFKVLTN KVVAANDGKP LPLYKKALCG VITGAIGATI GSPPDSSLIR MQANATLPAA RCQNYKNAFH ALYCCK
001: MAEEKKAPIS VWTTVKPFVN GGASGMLATC VIQPIDMIKV RIQLGQGSAA SITTNMLKNE GVGAFYKGLS AGLLRQATYT TARLGSFKLL TAKAIESNDG
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
101: KPLPLYQKAL CGLTAGAIGA CVGSPADLAL IRMQADNTLP LAQRRNYTNA FHALTRISAD EGVLALWKGC GPTVVRAMAL NMGMLASYDQ SAEYMRDNLG
201: FGEMSTVVGA SAVSGFCAAA CSLPFDFVKT QIQKMQPDAQ GKYPYTGSLD CAMKTLKEGG PLKFYSGFPV YCVRIAPHVM MTWIFLNQIT KFQKKIGM
Arabidopsis Description
DTCMitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.