Factsheet for VIT_06s0004g05940.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g01700.t01	Wine grape	extracellular	79.47	78.95
GSMUA_Achr6P15000_001	Banana	plasma membrane	76.16	75.66
TraesCS3D01G204800.2	Wheat	plasma membrane	70.86	74.83
TraesCS3B01G231700.3	Wheat	plasma membrane	70.86	74.83
TraesCS3A01G199800.1	Wheat	plasma membrane	70.86	74.83
AT5G58970.1	Thale cress	endoplasmic reticulum, vacuole	74.83	74.1
CDY32672	Canola	plasma membrane	73.84	73.84
Bra020342.1-P	Field mustard	plasma membrane	73.84	73.84
CDX80317	Canola	endoplasmic reticulum, plasma membrane	74.5	73.77
CDY02849	Canola	plasma membrane	73.51	73.51
Solyc09g031680.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	71.52	73.22
HORVU3Hr1G043380.11	Barley	plasma membrane, vacuole	69.21	72.57
KXG25746	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	70.53	72.2
Zm00001d024951_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	69.54	69.31
PGSC0003DMT400052443	Potato	vacuole	74.83	69.11
CDY55007	Canola	cytosol, peroxisome, plasma membrane	75.17	62.19
Bra002603.1-P	Field mustard	cytosol	66.23	61.35
Zm00001d004561_P001	Maize	plasma membrane	57.62	60.21
VIT_00s0407g00020.t01	Wine grape	mitochondrion	18.21	39.01
VIT_00s2349g00010.t01	Wine grape	cytosol	37.42	35.53
VIT_18s0001g07320.t01	Wine grape	cytosol	37.42	34.98
VIT_01s0026g02750.t01	Wine grape	cytosol	32.12	34.64
VIT_08s0007g07270.t01	Wine grape	cytosol, peroxisome, plastid	32.45	32.89
VIT_07s0104g01160.t01	Wine grape	cytosol	32.78	31.83
VIT_16s0039g00630.t01	Wine grape	cytosol	12.58	28.15
VIT_00s0827g00030.t01	Wine grape	extracellular	8.94	28.12
VIT_06s0004g00470.t01	Wine grape	cytosol	32.12	28.12
VIT_08s0217g00010.t01	Wine grape	cytosol, mitochondrion, nucleus	23.18	22.88
VIT_02s0012g01250.t01	Wine grape	mitochondrion, plastid	24.17	21.34
VIT_09s0002g04500.t01	Wine grape	cytosol, mitochondrion, plastid	21.52	20.9
VIT_10s0003g00060.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion	18.87	18.81

Protein Annotations

Gene3D:1.50.40.10	EntrezGene:100253572	wikigene:100253572	MapMan:2.4.2.3	MapMan:24.2.13	ProteinID:CBI16016
ProteinID:CBI16016.3	UniProt:D7SK40	EMBL:FN594951	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0005794	GO:GO:0005886	GO:GO:0006810	GO:GO:0006839	GO:GO:0008150	GO:GO:0015171
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0017077	GO:GO:0031966	GO:GO:1902600
GO:GO:1990542	InterPro:IPR018108	InterPro:IPR023395	EntrezGene:LOC100253572	wikigene:LOC100253572	InterPro:Mit_uncoupling_UCP-like
InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153	PRINTS:PR00784	PFscan:PS50920	PFscan:PS51257
PANTHER:PTHR24089	PANTHER:PTHR24089:SF622	SUPFAM:SSF103506	UniParc:UPI0001BE0D28	ArrayExpress:VIT_06s0004g05940	EnsemblPlantsGene:VIT_06s0004g05940
EnsemblPlants:VIT_06s0004g05940.t01	RefSeq:XP_002281053	RefSeq:XP_002281053.1	RefSeq:XP_003632181	RefSeq:XP_003632181.1	RefSeq:XP_019076025.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:6672956..6679156

Molecular Weight (calculated)

32711.2 Da

IEP (calculated)

9.630

GRAVY (calculated)

0.316

Length

302 amino acids

Sequence
(BLAST)

001: MSDLKHATEI SFAGTFACSA FSACFAELCT IPLDTAKVRL QLQKKGSTNE AGLPKYRGML GTVVTIALEE GLVALWKGIV PGLHRQCLYG GLRIGLYDPV
101: KIFFVGNDFV GDVPLFKKVL AALITGAIAI AVANPTDLVK VRLQAEGKLP PGVPRRYTGA LDAYYTIVRQ EGLAALWTGL GPNIARNAII NAAELASYDQ
201: IKQTILKISG FTDNLLTHLL AGLGAGFFAV CIGSPVDVVK SRMMGDSTYK STFDCFFKTL KNEGPFAFYK GFFPNFGRLG SWNAIMFLTL EQAKIFFRRG
301: VA

Best Arabidopsis Sequence Match ( AT5G58970.1 )
(BLAST)

001: MADFKPRIEI SFLETFICSA FAACFAELCT IPLDTAKVRL QLQRKIPTGD GENLPKYRGS IGTLATIARE EGISGLWKGV IAGLHRQCIY GGLRIGLYEP
101: VKTLLVGSDF IGDIPLYQKI LAALLTGAIA IIVANPTDLV KVRLQSEGKL PAGVPRRYAG AVDAYFTIVK LEGVSALWTG LGPNIARNAI VNAAELASYD
201: QIKETIMKIP FFRDSVLTHL LAGLAAGFFA VCIGSPIDVV KSRMMGDSTY RNTVDCFIKT MKTEGIMAFY KGFLPNFTRL GTWNAIMFLT LEQVKKVFLR
301: EVLYD

Arabidopsis Description

PUMP2Mitochondrial uncoupling protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWG1]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.