CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003511_P001	Maize	mitochondrion	91.33	90.13
TraesCS2B01G335300.1	Wheat	mitochondrion	84.67	83.83
TraesCS2D01G315000.1	Wheat	plastid	84.0	83.44
Os04t0449000-02	Rice	cytosol	85.67	83.44
TraesCS2A01G317100.1	Wheat	cytosol, mitochondrion, plastid	81.0	75.7
GSMUA_Achr6P30530_001	Banana	cytosol	40.67	73.05
VIT_01s0026g02750.t01	Wine grape	cytosol	63.67	68.21
PGSC0003DMT400047378	Potato	cytosol	59.33	61.59
KRG92168	Soybean	cytosol, endoplasmic reticulum, mitochondrion	61.67	60.66
Bra026855.1-P	Field mustard	mitochondrion	62.0	60.39
CDY33772	Canola	mitochondrion	62.0	60.39
KRH34619	Soybean	cytosol	61.33	60.33
Solyc05g007730.2.1	Tomato	cytosol	64.33	60.31
AT1G14140.1	Thale cress	mitochondrion	60.0	59.02
KXG25746	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	32.67	33.22
EES15143	Sorghum	cytosol	34.0	31.0
KXG23597	Sorghum	mitochondrion	27.67	27.85
EES17872	Sorghum	cytosol, extracellular, peroxisome, plastid	28.33	27.6
OQU84127	Sorghum	golgi, plasma membrane, plastid	34.0	26.77
EER91889	Sorghum	cytosol	22.0	22.3
KXG31527	Sorghum	cytosol, nucleus, peroxisome	23.0	19.49
EER95032	Sorghum	plastid	21.0	18.92
KXG38173	Sorghum	cytosol, extracellular, mitochondrion	18.0	17.65

Protein Annotations

Gene3D:1.50.40.10	MapMan:24.2.13	UniProt:A0A1B6PL62	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR018108	InterPro:IPR023395	EnsemblPlants:KXG26414
ProteinID:KXG26414	ProteinID:KXG26414.1	InterPro:Mit_carrier	InterPro:Mitochondrial_sb/sol_carrier	InterPro:Mt_carrier_dom_sf	PFAM:PF00153
PRINTS:PR00926	PFscan:PS50920	PANTHER:PTHR24089	PANTHER:PTHR24089:SF347	EnsemblPlantsGene:SORBI_3006G097700	SUPFAM:SSF103506
UniParc:UPI00081AD43D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:46722402..46725328

Molecular Weight (calculated)

32302.2 Da

IEP (calculated)

10.337

GRAVY (calculated)

-0.026

Length

300 amino acids

Sequence
(BLAST)

001: MSAHADAGGG RGGTLAKVSL SSVSAAMAEA STYPLDAVKT RLQLHRSPGG AGGRSAVRVA AELVRDGGVY RGFSPAVLRH LMYTPLRIVG YEHLRSTLAS
101: EGREVGLFEK ALAGGLSGVA AQVVASPADL MKVRMQADSR MLSQGIQPRY TGIPDAFTKI VRAEGFRGLW KGVVPNAQRA FLVNMGELTC YDQAKRLIIG
201: KQICDDNLYA HTLASVASGL SATTLSCPAD VIKTRMMNQG KEGKAIYRSS YDCLVKTVRH EGAMALWKGF LPTWARLGPW QFVFWVSYEK LRQASGISSF

Best Arabidopsis Sequence Match ( AT1G14140.1 )
(BLAST)

001: MERSRVTREA PTGTRILLAS LSAMVAESVT FPIDLTKTRM QLHGSGSASG AHRIGAFGVV SEIARKEGVI GLYKGLSPAI IRHLFYTPIR IIGYENLKGL
101: IVRSETNNSE SLPLATKALV GGFSGVIAQV VASPADLVKV RMQADGRLVS QGLKPRYSGP IEAFTKILQS EGVKGLWKGV LPNIQRAFLV NMGELACYDH
201: AKHFVIDKKI AEDNIFAHTL ASIMSGLAST SLSCPADVVK TRMMNQGENA VYRNSYDCLV KTVKFEGIRA LWKGFFPTWA RLGPWQFVFW VSYEKFRLLA
301: GISSF

Arabidopsis Description

PUMP3Mitochondrial uncoupling protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI74]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.