Factsheet for Bra029171.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38866	Canola	extracellular	99.66	99.66
Bra022551.1-P	Field mustard	plasma membrane	82.22	80.57
AT5G51480.1	Thale cress	extracellular, plasma membrane	79.32	78.38
Bra013877.1-P	Field mustard	plasma membrane	77.27	75.71
PGSC0003DMT400035984	Potato	plasma membrane	67.18	66.27
Solyc03g083900.2.1	Tomato	extracellular	66.5	65.71
KRH62611	Soybean	nucleus	65.98	65.2
KRH56354	Soybean	extracellular	65.81	65.14
VIT_16s0022g00680.t01	Wine grape	plasma membrane	65.13	64.36
Bra018479.1-P	Field mustard	plasma membrane	64.27	64.16
Bra000773.1-P	Field mustard	extracellular	63.76	63.76
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.9	54.96
Bra034914.1-P	Field mustard	extracellular	6.67	50.0
Bra015781.1-P	Field mustard	extracellular	44.79	48.43
Bra008241.1-P	Field mustard	extracellular	45.13	48.18
Bra034943.1-P	Field mustard	extracellular	44.27	47.79
Bra013582.1-P	Field mustard	extracellular	43.25	46.77
Bra017796.1-P	Field mustard	extracellular	42.91	46.48
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	38.97	46.25
Bra036800.1-P	Field mustard	extracellular	42.56	46.03
Bra025818.1-P	Field mustard	extracellular	43.25	45.92
Bra037137.1-P	Field mustard	extracellular	42.39	45.84
Bra032154.1-P	Field mustard	extracellular	42.05	45.64
Bra039389.1-P	Field mustard	plasma membrane	40.51	45.58
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.73	45.29
Bra001504.1-P	Field mustard	extracellular	42.56	45.19
Bra030850.1-P	Field mustard	plasma membrane	42.22	44.99
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	41.88	44.95
Bra001503.1-P	Field mustard	extracellular, plasma membrane	42.56	44.86
Bra030849.1-P	Field mustard	cytosol	12.65	44.85
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.22	44.58
Bra038001.1-P	Field mustard	extracellular, vacuole	41.71	43.96
Bra022513.1-P	Field mustard	extracellular	41.2	43.9
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	41.37	43.68
Bra034680.1-P	Field mustard	extracellular, plasma membrane	39.15	41.41
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	42.73	39.12
Bra002824.1-P	Field mustard	cytosol	6.15	33.96
Bra011721.1-P	Field mustard	mitochondrion, plastid	41.88	20.66

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra029171	EnsemblPlants:Bra029171.1	EnsemblPlants:Bra029171.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	UniProt:M4EK54	PFAM:PF00394
PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF123	SUPFAM:SSF49503	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000254014F	SEG:seg	:	:	:

Description

AT5G51480 (E=1e-277) SKS2 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase

Coordinates

chrA03:-:6679483..6681856

Molecular Weight (calculated)

65522.8 Da

IEP (calculated)

7.705

GRAVY (calculated)

-0.201

Length

585 amino acids

Sequence
(BLAST)

001: MPPPRFSIFA FALLFGLSLA EDPAISYVYE LSYVTASPLG VPQQVIAVNG IFPGPVVTAT TNYNVEVNVF NRLDEPLLLT WNGIEMRRNS WQDGVLGTNC
101: PIPPQWNFTY SFQVKDQIGS FFYFPSLNFQ RASGGFGPIV IDNQYRIPLP FATPDGEFTF MIGDWYTQNH TVLRSVLDSG KELAMPDGVL INGKGPYKYN
201: SSVPDGIQHE TVNVDPGKTY RIRVHNVGVS TSLNFRIQSH KLLLVETEGR YTSQTNFTDF DIHVGQSYSF LVTMDQNASS DYYIVASARF VDEEVWQRVT
301: GVGILHYSNS KGPASGPLPV PLTDVSHPWT VMNQQRAIKQ NTSSSGARPN PQGSYHYGQI NITGTYIFRS MPPTIINGSL RATLNGVSFL NPSTPMRLAD
401: KHRVKGVYKM DFPSRPVDSR PPRVGSSIIN ATYRRFVQII FQNNDTKVQS FHIDGYSFYV VAMDFGNWTE DRKGSYNNWD AIARSTVEVY PGAWTAVLMS
501: LDNAGVWNLR VENLDRWYLG QETYIRIINP EENGKTEMGQ PKNVLYCGAL KSLQKQQVHS SASSLLNGNL ILIFSFLMVL LASVC

Best Arabidopsis Sequence Match ( AT5G51480.1 )
(BLAST)

001: MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG
101: TNCPIPPNWN FTYDFQLKDQ IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL DSGKELGMPD GVLINGKGPF
201: KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ
301: RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR
401: LADDHKVKGD YMLDFPDRPL DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN NWDAVARSTV EVYPGAWTAV
501: LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC

Arabidopsis Description

SKS2Monocopper oxidase-like protein SKS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHN6]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.