Factsheet for Bra017796.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42716	Canola	extracellular	99.63	99.63
AT4G37160.1	Thale cress	extracellular	91.67	91.5
Bra032154.1-P	Field mustard	extracellular	78.33	78.48
KRH04708	Soybean	endoplasmic reticulum	67.41	66.91
KRH57766	Soybean	extracellular	22.41	64.36
VIT_00s0253g00050.t01	Wine grape	extracellular, mitochondrion	68.7	61.73
Bra037137.1-P	Field mustard	extracellular	59.26	59.15
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	59.44	58.9
Bra036800.1-P	Field mustard	extracellular	58.89	58.78
Bra030849.1-P	Field mustard	cytosol	17.04	55.76
Bra013582.1-P	Field mustard	extracellular	54.07	53.97
Bra015781.1-P	Field mustard	extracellular	54.07	53.97
Bra008241.1-P	Field mustard	extracellular	53.7	52.92
Bra034943.1-P	Field mustard	extracellular	52.59	52.4
Bra025818.1-P	Field mustard	extracellular	51.85	50.82
Bra038001.1-P	Field mustard	extracellular, vacuole	51.67	50.27
Bra001503.1-P	Field mustard	extracellular, plasma membrane	51.67	50.27
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	51.11	49.82
Bra030850.1-P	Field mustard	plasma membrane	50.37	49.54
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	50.74	49.46
Bra039389.1-P	Field mustard	plasma membrane	47.59	49.42
Bra001504.1-P	Field mustard	extracellular	50.37	49.36
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	49.81	48.73
Bra034680.1-P	Field mustard	extracellular, plasma membrane	48.7	47.56
Bra034914.1-P	Field mustard	extracellular	6.67	46.15
Bra018479.1-P	Field mustard	plasma membrane	49.44	45.56
Bra000773.1-P	Field mustard	extracellular	49.07	45.3
Bra022513.1-P	Field mustard	extracellular	45.93	45.17
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.63	45.04
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	40.56	44.42
Bra002824.1-P	Field mustard	cytosol	8.7	44.34
Bra029171.1-P	Field mustard	extracellular	46.48	42.91
Bra022551.1-P	Field mustard	plasma membrane	47.04	42.55
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	50.19	42.41
Bra013877.1-P	Field mustard	plasma membrane	45.74	41.37
Bra011721.1-P	Field mustard	mitochondrion, plastid	89.26	40.64

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra017796	EnsemblPlants:Bra017796.1	EnsemblPlants:Bra017796.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972
UniProt:M4DMR1	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF113
SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002540CCE	SEG:seg	:

Description

AT4G37160 (E=3e-290) sks15 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase

Coordinates

chrA03:+:30531108..30533361

Molecular Weight (calculated)

60835.0 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.117

Length

540 amino acids

Sequence
(BLAST)

001: MKQTNLLCNL FIGTLLVWLG SVLVKAEDPY LFYTWTVTYG TRSPLGVPQQ VILINGQFPG PAIEAVTNNN IVVNLINKLD EPFLITWNGI KQRRTSWQDG
101: VLGTNCPIPP NSNWTYQFQL KDQIGTFTYF ASTSMHRASG AFGALNINQR SVITTPYLTP DGDFTLLVTD WFKLSHKDLR KRLDAGYALP LPDALLINGA
201: SKGLIFTGQQ GKTYKFRVSN VGIATSINFR IQNHTLTLIE VEGAHTLQES YESLDVHVGQ SVTVLVTLKA SVRDYYIVAS SRFTKPVLNT TASLRYLGSK
301: NAVYGPLPVG PTYHIHWSMK QARTIRMNLT ANAARPNPQG SYHYGTIPIN RTLVLANAAT MLYGKLRYTV NRISYINPTT PLKLADWYNI SGVFDFKTIL
401: STPTIGPAHF GTSVFDIELH EFVEIVFQND ERSIQSWHMD GTSAFLVGFG SGTWNETMRK RYNLVDAVAR HTFQVYPLSW TSILVSLDNK GMWNLRSQIW
501: SRRYLGQELY VRVWNDEKSL YTEADPPLNA LYCGLAKRPL

Best Arabidopsis Sequence Match ( AT4G37160.1 )
(BLAST)

001: MKQTNLLVCK LFIGALFWLG SVLVNAEDPY MFYTWTVTYG TRSPLGVPQQ VILINGQFPG PAIEAVTNNN IVVNLINKLD EPFLITWNGV KQRRTSWQDG
101: VLGTNCPIQP NSNWTYQFQL KDQIGTYTYF ASTSLHRASG AFGALNINQR SVITTPYPTP DGDFTLLVSD WFSNMTHKDL RKSLDAGSAL PLPDALLING
201: VSKGLIFTGQ QGKTYKFRVS NVGIATSINF RIQNHTMSLI EVEGAHTLQE SYESLDVHVG QSMTVLVTLK ASVRDYFIVA STRFTKPVLT TTASLRYQGS
301: KNAAYGPLPI GPTYHIHWSM KQARTIRMNL TANAARPNPQ GSFHYGTIPI NRTLVLANAA TLIYGKLRYT VNRISYINPT TPLKLADWYN ISGVFDFKTI
401: ISTPTTGPAH IGTSVIDVEL HEFVEIVFQN DERSIQSWHM DGTSAYAVGY GSGTWNVTMR KRYNLVDAVP RHTFQVYPLS WTTILVSLDN KGMWNLRSQI
501: WSRRYLGQEL YVRVWNDEKS LYTEAEPPLN VLYCGKAKRP L

Arabidopsis Description

sks15Sks15 [Source:UniProtKB/TrEMBL;Acc:A0A178UTS2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.