Factsheet for Bra015781.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87633	Canola	extracellular	99.82	99.82
CDX73238	Canola	extracellular	99.26	99.26
Bra008241.1-P	Field mustard	extracellular	92.98	91.79
AT1G76160.1	Thale cress	extracellular	91.31	91.31
KRH06000	Soybean	endoplasmic reticulum	84.66	84.66
KRH60965	Soybean	nucleus	84.84	83.91
Bra034943.1-P	Field mustard	extracellular	83.55	83.39
KRH17495	Soybean	nucleus	83.92	83.0
KRH51639	Soybean	nucleus	83.73	82.82
VIT_18s0001g00470.t01	Wine grape	extracellular	82.07	82.07
Solyc04g082140.2.1	Tomato	extracellular	79.67	79.81
PGSC0003DMT400025805	Potato	extracellular	79.3	79.44
Solyc12g094460.1.1	Tomato	extracellular	77.08	76.65
PGSC0003DMT400075398	Potato	extracellular	76.34	75.92
Solyc12g094470.1.1	Tomato	nucleus	73.38	73.11
PGSC0003DMT400075620	Potato	extracellular	72.64	72.38
Bra025818.1-P	Field mustard	extracellular	72.09	70.78
Bra013582.1-P	Field mustard	extracellular	69.5	69.5
Bra022513.1-P	Field mustard	extracellular	61.92	61.02
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	68.95	58.37
Bra037137.1-P	Field mustard	extracellular	57.3	57.3
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	57.67	57.25
Bra036800.1-P	Field mustard	extracellular	56.56	56.56
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.45	54.15
Bra017796.1-P	Field mustard	extracellular	53.97	54.07
Bra001503.1-P	Field mustard	extracellular, plasma membrane	55.45	54.05
Bra038001.1-P	Field mustard	extracellular, vacuole	55.27	53.87
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	54.9	53.8
Bra001504.1-P	Field mustard	extracellular	54.71	53.72
Bra039389.1-P	Field mustard	plasma membrane	51.39	53.46
Bra030849.1-P	Field mustard	cytosol	16.27	53.33
Bra030850.1-P	Field mustard	plasma membrane	53.79	53.01
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	53.79	52.53
Bra032154.1-P	Field mustard	extracellular	51.94	52.13
Bra034680.1-P	Field mustard	extracellular, plasma membrane	52.68	51.54
KRH57767	Soybean	cytosol, peroxisome	32.53	49.16
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	43.81	48.07
Bra002824.1-P	Field mustard	cytosol	8.87	45.28
Bra018479.1-P	Field mustard	plasma membrane	48.98	45.22
Bra000773.1-P	Field mustard	extracellular	48.8	45.13
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.35	44.87
Bra029171.1-P	Field mustard	extracellular	48.43	44.79
Bra022551.1-P	Field mustard	plasma membrane	49.17	44.56
Bra013877.1-P	Field mustard	plasma membrane	46.95	42.55
Bra034914.1-P	Field mustard	extracellular	6.1	42.31
Bra011721.1-P	Field mustard	mitochondrion, plastid	51.76	23.61

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra015781	EnsemblPlants:Bra015781.1	EnsemblPlants:Bra015781.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:CuRO_1_AAO-like	InterPro:CuRO_3_AO-like	InterPro:Cupredoxin	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR008972	UniProt:M4DH04	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF90	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002542057

Description

AT1G76160 (E=1e-300) sks5 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase

Coordinates

chrA07:-:20884352..20887203

Molecular Weight (calculated)

59896.8 Da

IEP (calculated)

8.760

GRAVY (calculated)

-0.223

Length

541 amino acids

Sequence
(BLAST)

001: MAANASFAAA LIVGFALLFA VTAESPYRFF EWNVTYGDIY PLGVRQQGIL INGQFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGVQQR RNSYVDGVYG
101: TTCPIPPGKN YTYILQVKDQ IGSFYYFPSL AFHKAAGGFG GLRILSRPGI PVPFADPAGD YTVLIGDWYK SNHTDLKAQL DSGRKLPLPD GILINGRGSG
201: ATLNVEQGKT YRLRISNIGL QHSLNFRIQN HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQPAQ DYYVVVSSRF TSDVLTTTGV LRYSGSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGMINTTRTI RLASSAGQVN GKQRYAVNSV SFNPADTPLK LADYFKIDGV YRVGSIQSQP
401: TGGGIYLDTS VMQTDYRTFI EIVFENSEDI VQSWHLDGYS FWVVGMDGGQ WTPDSRNEYN LRDAVARCTV QVYPSSWTAI YIALDNVGMW NLRSEFWARQ
501: YLGQQFYLRV YTTSTSLRDE YPIPKNALLC GRASGRRTRP L

Best Arabidopsis Sequence Match ( AT1G76160.1 )
(BLAST)

001: MAGSASFAAA LFIGLSLLFA VTAEDPYRFF EWNITYGDIY PLGVRQQGIL INGAFPGPDI HSVTNDNLII NVYNSLDEPF LLSWNGIQQR RNSFVDGVYG
101: TTCPIPPGKN YTYILQMKDQ IGSFYYFPSL GFHKAAGGFG GIRILSRPRI PVPFPDPAGD TTVLIGDWYK ANHTDLRAQL DNGKKLPLPD GILINGRSSG
201: ATLNVEQGKT YRFRISNVGL QDSLNFRIQD HKMKVVEVEG THTLQTTFSS LDVHVGQSYS VLVTADQTPR DYYVVVSSRF TSNVLTTTGI FRYSNSAGGV
301: SGPIPGGPTI QIDWSLNQAR AIRTNLSASG PRPNPQGSYH YGMINTTRTI RLASSAGQVD GKQRYAVNSV SFKPADTPLK IADYFKIDGV YRSGSIQYQP
401: TGGGIYLDTS VMQVDYRTFV EIIFENSEDI VQSWHLDGYS FWVVGMDGGQ WSPDSRNEYN LRDAVARCTV QVYPSSWTAI LIALDNVGMW NLRSEFWARQ
501: YLGQQLYLRV YTPSTSLRDE YPIPKNALLC GRASGRSTRP L

Arabidopsis Description

sks5Sks5 [Source:UniProtKB/TrEMBL;Acc:A0A178WJJ9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.