Factsheet for Bra020700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48757	Canola	extracellular, plasma membrane, vacuole	99.33	99.33
AT5G48450.1	Thale cress	extracellular	87.06	83.41
VIT_07s0141g00540.t01	Wine grape	extracellular	74.62	74.62
PGSC0003DMT400074313	Potato	extracellular	72.27	73.76
Solyc09g055930.2.1	Tomato	extracellular	71.76	73.12
KRH46577	Soybean	mitochondrion	74.45	69.54
GSMUA_Achr3P17240_001	Banana	cytosol	68.91	69.26
EER92264	Sorghum	extracellular	66.05	66.61
TraesCS3A01G085900.1	Wheat	extracellular	65.55	65.77
TraesCS3D01G086400.1	Wheat	extracellular	65.71	65.49
TraesCS3B01G101500.1	Wheat	extracellular	65.55	65.44
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	63.53	63.74
TraesCS3B01G101200.1	Wheat	extracellular	65.55	61.13
HORVU3Hr1G015510.2	Barley	cytosol	36.64	61.06
Bra000773.1-P	Field mustard	extracellular	59.33	60.34
Bra018479.1-P	Field mustard	plasma membrane	59.33	60.24
Zm00001d029193_P001	Maize	mitochondrion	66.39	57.16
Bra013877.1-P	Field mustard	plasma membrane	56.64	56.45
Bra022551.1-P	Field mustard	plasma membrane	56.3	56.11
Bra029171.1-P	Field mustard	extracellular	54.96	55.9
Bra034943.1-P	Field mustard	extracellular	45.21	49.63
Bra017796.1-P	Field mustard	extracellular	45.04	49.63
Bra015781.1-P	Field mustard	extracellular	44.87	49.35
Bra037137.1-P	Field mustard	extracellular	44.71	49.17
Bra036800.1-P	Field mustard	extracellular	44.71	49.17
Bra012117.1-P	Field mustard	extracellular, golgi, vacuole	44.87	48.99
Bra039389.1-P	Field mustard	plasma membrane	42.18	48.27
Bra001503.1-P	Field mustard	extracellular, plasma membrane	44.71	47.93
Bra030850.1-P	Field mustard	plasma membrane	44.2	47.91
Bra013582.1-P	Field mustard	extracellular	43.36	47.69
Bra008241.1-P	Field mustard	extracellular	43.87	47.63
Bra032154.1-P	Field mustard	extracellular	43.03	47.5
Bra002825.1-P	Field mustard	extracellular, golgi, vacuole	44.03	47.29
Bra034679.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	43.87	47.28
Bra030849.1-P	Field mustard	cytosol	13.11	47.27
Bra008223.1-P	Field mustard	cytosol, extracellular, nucleus	39.16	47.26
Bra001504.1-P	Field mustard	extracellular	43.7	47.19
Bra025818.1-P	Field mustard	extracellular	43.53	47.01
Bra039388.1-P	Field mustard	extracellular, plasma membrane, vacuole	43.53	46.75
Bra038001.1-P	Field mustard	extracellular, vacuole	43.19	46.31
Bra034914.1-P	Field mustard	extracellular	6.05	46.15
Bra034680.1-P	Field mustard	extracellular, plasma membrane	41.34	44.48
Bra022513.1-P	Field mustard	extracellular	40.67	44.08
Bra033564.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	43.87	40.85
Bra002824.1-P	Field mustard	cytosol	6.72	37.74
Bra011721.1-P	Field mustard	mitochondrion, plastid	43.53	21.84

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	EnsemblPlantsGene:Bra020700	EnsemblPlants:Bra020700.1	EnsemblPlants:Bra020700.1-P	InterPro:Cu-oxidase
InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152
GO:GO:0009506	GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	UniProt:M4DW06
PFAM:PF00394	PFAM:PF07731	PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254631B	SEG:seg	:	:

Description

AT5G48450 (E=2e-271) sks3 | sks3 (SKU5 Similar 3); copper ion binding / oxidoreductase

Coordinates

chrA02:-:23682845..23685658

Molecular Weight (calculated)

65893.2 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.160

Length

595 amino acids

Sequence
(BLAST)

001: MRCSPPHLPC TSLVVLFLSV ATVCLAADPY VFFDWTVSYL TASPLGTRQQ VIGINGQFPG PILNVTTNWN VVVNVKNNLD EPLLLTWNGI QHRKNSWQDG
101: VLGTNCPIPS GWNWTYEFQV KDQIGSFFYF PSTNFQRAAG GYGGIIINNR DIIPVPFLLP DGDVTLFISD WFTKSHKKLR KDVESKIDFG APDGILMNGF
201: GPFPYSSELA SGGFPYGTIN VEPGRTYRFR VHNSGIATTL NFRIQNHNLL LVETEGSYTV QQNYTNMDIH VGQSFSFLVT MDQSGSNDYY IVASTRFTKS
301: SSSPKATGVA ILHYSSSQGP ASGPLPDPPI ESDTSFSMNQ ARSIRLNVSA GAARPNPQGS FKYGQITVTD VYVIVNSPPE KIDGRLRATL NGISYLPPST
401: PLKLAQQYNI SGVYKLDFPK RPMNRHPKVD TSVMNGTYKG FMEIIFQNSD TTVKSYHLDG YAFFVVGMDF GLWTENSRSL YNKGDGVARS TTQVFPGAWT
501: AILVYLDNAG MWNLRIDNLA SWYLGQEVYL NVVNPEIDTS ENSIPENTIY CGRLSPLQRD QSQRVNFSGS ARSILATSRG ILLALFAILI SSLAR

Best Arabidopsis Sequence Match ( AT5G48450.2 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VSSLAR

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.