Factsheet for TraesCS3B01G101500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G085900.1	Wheat	extracellular	95.64	96.12
TraesCS3D01G086400.1	Wheat	extracellular	95.3	95.14
TraesCS3B01G101200.1	Wheat	extracellular	95.3	89.03
HORVU3Hr1G015510.2	Barley	cytosol	53.02	88.52
EER92264	Sorghum	extracellular	81.54	82.37
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	80.54	80.94
VIT_07s0141g00540.t01	Wine grape	extracellular	69.97	70.08
Zm00001d029193_P001	Maize	mitochondrion	81.21	70.04
PGSC0003DMT400074313	Potato	extracellular	68.29	69.81
GSMUA_Achr3P17240_001	Banana	cytosol	69.3	69.76
Solyc09g055930.2.1	Tomato	extracellular	67.28	68.66
CDY48757	Canola	extracellular, plasma membrane, vacuole	65.6	65.71
CDY05676	Canola	extracellular, plasma membrane, vacuole	65.6	65.6
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	65.44	65.55
KRH46577	Soybean	mitochondrion	69.63	65.15
TraesCS1B01G204100.1	Wheat	extracellular, plasma membrane	62.08	62.18
AT5G48450.1	Thale cress	extracellular	63.93	61.35
TraesCS7B01G202500.1	Wheat	extracellular	59.9	59.8
TraesCS3B01G195700.1	Wheat	extracellular	38.09	50.22
TraesCS7B01G359700.1	Wheat	extracellular	45.13	49.63
TraesCS2B01G274800.1	Wheat	vacuole	44.97	49.17
TraesCS2B01G277200.1	Wheat	extracellular	44.8	48.81
TraesCS2B01G423900.1	Wheat	extracellular	43.29	46.32
TraesCS3B01G371800.1	Wheat	extracellular, golgi, vacuole	42.62	45.68
TraesCS1B01G314600.1	Wheat	plasma membrane	41.61	44.36

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR008972	PFAM:PF00394	PFAM:PF07731	PFAM:PF07732
PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3B01G101500	EnsemblPlants:TraesCS3B01G101500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:68442322..68444953

Molecular Weight (calculated)

65684.7 Da

IEP (calculated)

5.862

GRAVY (calculated)

-0.096

Length

596 amino acids

Sequence
(BLAST)

001: MALLHLLSLL LLCPEPALAG DPFAYFDWEV TYQSARPLGV AQKVIAINGQ FPGPPLNVTT NWNVVVNVRN ALDEPLLLTW HGLQHRKTPW QDGVAGTNCP
101: IPAGWNWTYQ FQVKDQVGSF FYSPSAAPLH RAAGGYGGIV VNNRDVIPIP FPFPDGGDLT LFIGDWYVRS HKDLRRSLDA GAPLGPPDGV LVNGLGPYRY
201: NDSLVPPAIT YERINVEPGR TYRLRVHNVG VSTSLNFRIQ GHSLLLVETE GSYTSQQNYS NMDIHVGQSY SFLVTMDQNA STDYYVVASA RFVVADPGAV
301: DKLTGVAILH YSNSQGPASG PLPAAPDDQY DTAFSINQAR SIRWNVAASG ARPNPQGSFH YGDITVTDVY LLQSRPPELI DGQLRSTING ISYIAPSTPL
401: ILAQLFNVPG VFKLDFPNHP MNRLPKVDTS VINCTYKGFM EIIFQNNATT VQSYHLDGYA FFVVGMDYGL WTDNSRGTYN KWDGVARSTI QVFPGAWTAV
501: LVFLDNAGIW NLRVENLDSW YLGQELYISV VNPEEDHSDK TPLPLPDNTI FCGALSSLQK EQSHRFQYSG ASRVGKTVSA VMISIAWLAA SYLVDI

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.