Factsheet for Solyc09g055930.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074313	Potato	extracellular	96.58	96.74
VIT_07s0141g00540.t01	Wine grape	extracellular	76.88	75.46
CDY48757	Canola	extracellular, plasma membrane, vacuole	73.46	72.1
CDY05676	Canola	extracellular, plasma membrane, vacuole	73.46	71.98
GSMUA_Achr3P17240_001	Banana	cytosol	72.95	71.96
Bra020700.1-P	Field mustard	extracellular, plasma membrane, vacuole	73.12	71.76
EER92264	Sorghum	extracellular	70.03	69.32
KRH46577	Soybean	mitochondrion	75.0	68.76
TraesCS3A01G085900.1	Wheat	extracellular	69.35	68.3
TraesCS3B01G101500.1	Wheat	extracellular	68.66	67.28
TraesCS3D01G086400.1	Wheat	extracellular	68.66	67.17
AT5G48450.1	Thale cress	extracellular	71.23	66.99
Os01t0100400-01	Rice	extracellular, plasma membrane, vacuole	67.12	66.1
HORVU3Hr1G015510.2	Barley	cytosol	39.04	63.87
TraesCS3B01G101200.1	Wheat	extracellular	68.49	62.7
Solyc08g079090.2.1	Tomato	extracellular	61.64	61.12
Zm00001d029193_P001	Maize	mitochondrion	71.58	60.49
Solyc03g083900.2.1	Tomato	extracellular	60.27	59.46
Solyc02g065170.2.1	Tomato	nucleus	47.6	51.58
Solyc01g111970.2.1	Tomato	extracellular	47.09	51.31
Solyc02g090360.2.1	Tomato	extracellular	46.23	50.19
Solyc07g052240.2.1	Tomato	nucleus	46.23	49.72
Solyc04g082140.2.1	Tomato	extracellular	45.72	49.44
Solyc02g080670.2.1	Tomato	nucleus	46.06	49.09
Solyc07g052230.2.1	Tomato	extracellular	45.03	48.98
Solyc05g055490.1.1	Tomato	extracellular	45.38	48.45
Solyc12g094460.1.1	Tomato	extracellular	43.49	46.69
Solyc04g081520.1.1	Tomato	extracellular	43.15	46.58
Solyc01g005510.2.1	Tomato	extracellular, plasma membrane, vacuole	44.01	46.14
Solyc12g094470.1.1	Tomato	nucleus	42.81	46.04
Solyc05g055710.2.1	Tomato	extracellular	35.62	45.81
Solyc02g080700.1.1	Tomato	cytosol	7.71	45.45
Solyc11g008860.1.1	Tomato	extracellular	43.15	45.41
Solyc01g056310.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	42.98	45.31
Solyc03g063150.2.1	Tomato	unclear	42.98	45.14
Solyc05g055720.1.1	Tomato	nucleus	5.65	36.67
Solyc11g008030.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	45.72	36.48

Protein Annotations

Gene3D:2.60.40.420	MapMan:50.1.10	InterPro:Cu-oxidase	InterPro:Cu-oxidase_2	InterPro:Cu-oxidase_3	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0016722
GO:GO:0046658	GO:GO:0055114	InterPro:IPR008972	UniProt:K4CT88	PFAM:PF00394	PFAM:PF07731
PFAM:PF07732	PANTHER:PTHR11709	PANTHER:PTHR11709:SF58	SUPFAM:SSF49503	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g055930.2
EnsemblPlants:Solyc09g055930.2.1	UniParc:UPI000276B158	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:-:46192086..46197632

Molecular Weight (calculated)

65202.3 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.116

Length

584 amino acids

Sequence
(BLAST)

001: MLLSYYCYLL CFTTLCLAED PYVYFDWTIS YITASPLGIK QQVIGINGQF PGPILNVTTN WNVVVNVKND LDEPMLLTWN GIQQRKDTWQ DGVSGTNCPI
101: PASWNWTYEF QVKDQIGSFF YFPSLRFQRA AGGYGGITIN NRNVIPLPFA TPDGDITLFI SDWFIKSHKE LRKEIETGVG LGAPDGILIN GLGPYHYDNA
201: VVSGGISYQT VNVESGKTYR LRVHNVGVST SLNFRIQSHN LLLVETEGSY TVQQNYTSLD IHVGQSYSFL VTMDQNGSSD YYIVASPRFV NSSDSSKSVG
301: VSVLHYSNSQ GPASGPLPDP PMESDTFFSM SQARSIRWNV SAGAARPNPQ GSFKYGEITV TDVFVLHNRP AELIEGKWRT TLSGISYLAP STPLKLAEQF
401: NIPSVFKLDF PNKMMNRPAK VDTSVINGTY KAFVEIIFQN NDTTVQSYHL DGYAFFVVGM DYGLWTENSR STYNKWDGVA RCTTQVFPGA WTAILVFLDN
501: PGIWNLRAQN LDSWYLGQET YINVVNPENS ELPVPANTIF CGALSPLQKD QARRVNFSCA PSLMKTMKLI FIGFVVSLLG NFLR

Best Arabidopsis Sequence Match ( AT5G48450.1 )
(BLAST)

001: MRCFPPPLWC TSLVVFLSVT GALAADPYVF FDWTVSYLSA SPLGTRQQVI GINGQFPGPI LNVTTNWNVV MNVKNNLDEP LLLTWNGIQH RKNSWQDGVL
101: GTNCPIPSGW NWTYEFQVKD QIGSFFYFPS TNFQRASGGY GGIIVNNRAI IPVPFALPDG DVTLFISDWY TKSHKKLRKD VESKNGLRPP DGIVINGFGP
201: FASNGSPFGT INVEPGRTYR FRVHNSGIAT SLNFRIQNHN LLLVETEGSY TIQQNYTNMD IHVGQSFSFL VTMDQSGSND YYIVASPRFA TSIKASGVAV
301: LRYSNSQGPA SGPLPDPPIE LDTFFSMNQA RSLRLNLSSG AARPNPQGSF KYGQITVTDV YVIVNRPPEM IEGRLRATLN GISYLPPATP LKLAQQYNIS
401: GVYKLDFPKR PMNRHPRVDT SVINGTFKGF VEIIFQNSDT TVKSYHLDGY AFFVVGMDFG LWTENSRSTY NKGDAVARST TQVFPGAWTA VLVSLDNAGM
501: WNLRIDNLAS WYLGQELYLS VVNPEIDIDS SENSVPKNSI YCGRLSPLQK DQAQRVNFSG SQRSIFVTSR GILLALFAIL VNINRLCNTK KILDSTAKAQ
601: TDLSLVETDR ISEKNRDRIS Y

Arabidopsis Description

sks3SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.