Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016672 | Potato | endoplasmic reticulum | 97.83 | 97.83 |
| Solyc01g005510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 81.05 | 80.61 |
| CDY68876 | Canola | cytosol | 16.07 | 79.46 |
| HORVU4Hr1G048550.1 | Barley | cytosol, extracellular | 8.48 | 74.6 |
| VIT_00s1643g00010.t01 | Wine grape | vacuole | 70.04 | 70.55 |
| VIT_00s1309g00010.t01 | Wine grape | vacuole | 70.04 | 70.55 |
| Solyc11g008860.1.1 | Tomato | extracellular | 69.13 | 69.01 |
| Solyc03g063150.2.1 | Tomato | unclear | 68.77 | 68.53 |
| Bra030849.1-P | Field mustard | cytosol | 20.22 | 67.88 |
| CDY10549 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 66.79 | 67.4 |
| GSMUA_Achr11P... | Banana | vacuole | 64.08 | 67.36 |
| KRH31599 | Soybean | extracellular | 66.97 | 67.21 |
| Bra030850.1-P | Field mustard | plasma membrane | 66.43 | 67.03 |
| CDY56013 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 66.43 | 67.03 |
| Solyc05g055710.2.1 | Tomato | extracellular | 54.87 | 66.96 |
| KRG89471 | Soybean | mitochondrion | 67.15 | 66.79 |
| GSMUA_Achr8P01580_001 | Banana | extracellular | 62.09 | 66.67 |
| GSMUA_Achr9P04930_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 63.0 | 66.6 |
| KRH50513 | Soybean | vacuole | 66.06 | 66.55 |
| CDY23596 | Canola | extracellular, plasma membrane | 66.61 | 66.49 |
| GSMUA_Achr5P27810_001 | Banana | extracellular | 63.18 | 66.41 |
| CDY43995 | Canola | extracellular, plasma membrane | 66.43 | 66.31 |
| CDX82541 | Canola | extracellular, plasma membrane | 66.06 | 65.95 |
| AT1G55560.1 | Thale cress | extracellular | 65.34 | 65.94 |
| AT3G13390.1 | Thale cress | extracellular, plasma membrane, vacuole | 65.88 | 65.88 |
| Bra001503.1-P | Field mustard | extracellular, plasma membrane | 65.88 | 65.77 |
| CDX75707 | Canola | extracellular, plasma membrane, vacuole | 65.7 | 65.59 |
| Solyc05g055720.1.1 | Tomato | nucleus | 10.65 | 65.56 |
| CDY50029 | Canola | extracellular | 63.72 | 65.37 |
| CDY24189 | Canola | extracellular, plasma membrane, vacuole | 65.34 | 65.34 |
| CDY43352 | Canola | extracellular, plasma membrane | 59.93 | 65.23 |
| AT1G55570.1 | Thale cress | extracellular, plasma membrane | 65.34 | 65.23 |
| Bra038001.1-P | Field mustard | extracellular, vacuole | 65.34 | 65.23 |
| GSMUA_Achr8P09380_001 | Banana | extracellular | 61.73 | 65.14 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.73 | 64.9 |
| Bra039388.1-P | Field mustard | extracellular, plasma membrane, vacuole | 64.8 | 64.8 |
| Bra001504.1-P | Field mustard | extracellular | 64.44 | 64.79 |
| CDY43353 | Canola | extracellular, plasma membrane, vacuole | 64.62 | 64.62 |
| CDX82540 | Canola | extracellular | 64.26 | 64.61 |
| CDX75708 | Canola | extracellular | 64.26 | 64.61 |
| CDY43994 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 64.26 | 64.49 |
| Bra034679.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 64.26 | 64.49 |
| CDY23597 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 64.26 | 64.49 |
| AT3G13400.1 | Thale cress | extracellular, plasma membrane | 64.08 | 64.43 |
| GSMUA_Achr11P... | Banana | extracellular | 61.19 | 64.08 |
| CDX97352 | Canola | mitochondrion | 56.32 | 63.93 |
| CDY24188 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.36 | 63.82 |
| Bra039389.1-P | Field mustard | plasma membrane | 59.57 | 63.46 |
| CDY49392 | Canola | extracellular | 50.9 | 63.23 |
| KRH50514 | Soybean | endoplasmic reticulum, extracellular, vacuole | 63.0 | 63.22 |
| Bra034680.1-P | Field mustard | extracellular, plasma membrane | 63.0 | 63.11 |
| CDY54363 | Canola | extracellular | 61.73 | 62.75 |
| CDY68850 | Canola | extracellular | 34.3 | 62.71 |
| HORVU3Hr1G080360.1 | Barley | extracellular, golgi, vacuole | 62.64 | 62.3 |
| GSMUA_Achr9P16870_001 | Banana | extracellular, plasma membrane, vacuole | 62.45 | 62.12 |
| Bra002825.1-P | Field mustard | extracellular, golgi, vacuole | 62.09 | 62.09 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 63.18 | 62.06 |
| Zm00001d038521_P001 | Maize | extracellular, plasma membrane, vacuole | 62.45 | 61.9 |
| TraesCS3A01G340200.1 | Wheat | extracellular, golgi, vacuole | 61.73 | 61.73 |
| TraesCS3B01G371800.1 | Wheat | extracellular, golgi, vacuole | 61.37 | 61.15 |
| TraesCS3D01G333700.1 | Wheat | extracellular, golgi, vacuole | 61.37 | 61.15 |
| Zm00001d010630_P003 | Maize | extracellular, golgi, vacuole | 62.82 | 61.05 |
| EES19711 | Sorghum | extracellular | 61.01 | 60.47 |
| Os01t0816700-01 | Rice | plasma membrane | 60.29 | 60.4 |
| EES01652 | Sorghum | extracellular, golgi, vacuole | 60.47 | 60.04 |
| HORVU1Hr1G069130.1 | Barley | extracellular, golgi, plasma membrane | 60.65 | 60.0 |
| Zm00001d012524_P001 | Maize | vacuole | 60.11 | 59.57 |
| Zm00001d043090_P001 | Maize | vacuole | 59.57 | 59.25 |
| TraesCS1D01G303600.1 | Wheat | extracellular | 59.21 | 58.68 |
| TraesCS1A01G304100.1 | Wheat | extracellular, golgi, plasma membrane | 59.21 | 58.68 |
| TraesCS1B01G314600.1 | Wheat | plasma membrane | 59.03 | 58.5 |
| GSMUA_Achr3P09610_001 | Banana | plastid | 63.36 | 57.45 |
| GSMUA_Achr5P07530_001 | Banana | extracellular, golgi, vacuole | 63.9 | 56.64 |
| Bra002824.1-P | Field mustard | cytosol | 10.29 | 53.77 |
| Solyc01g111970.2.1 | Tomato | extracellular | 51.99 | 53.73 |
| CDY32795 | Canola | cytosol | 9.93 | 52.88 |
| Solyc04g082140.2.1 | Tomato | extracellular | 51.26 | 52.59 |
| Solyc12g094460.1.1 | Tomato | extracellular | 50.72 | 51.65 |
| Solyc07g052230.2.1 | Tomato | extracellular | 49.82 | 51.4 |
| Solyc02g065170.2.1 | Tomato | nucleus | 49.46 | 50.83 |
| Solyc07g052240.2.1 | Tomato | nucleus | 49.64 | 50.64 |
| Solyc02g080670.2.1 | Tomato | nucleus | 50.0 | 50.55 |
| Solyc12g094470.1.1 | Tomato | nucleus | 48.01 | 48.99 |
| Solyc02g090360.2.1 | Tomato | extracellular | 47.47 | 48.88 |
| Zm00001d047156_P002 | Maize | cytosol | 17.15 | 47.03 |
| Solyc02g080700.1.1 | Tomato | cytosol | 8.3 | 46.46 |
| Solyc04g081520.1.1 | Tomato | extracellular | 42.42 | 43.44 |
| Solyc09g055930.2.1 | Tomato | extracellular | 45.31 | 42.98 |
| Solyc08g079090.2.1 | Tomato | extracellular | 43.68 | 41.09 |
| Solyc03g083900.2.1 | Tomato | extracellular | 42.42 | 39.7 |
| Zm00001d037444_P001 | Maize | mitochondrion | 19.13 | 39.55 |
| Solyc05g055490.1.1 | Tomato | extracellular | 38.99 | 39.49 |
| Os05t0485800-00 | Rice | plasma membrane | 38.81 | 31.57 |
| Solyc11g008030.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 38.99 | 29.51 |
| Zm00001d004806_P001 | Maize | plastid | 4.51 | 29.41 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:50.1.10 | InterPro:Cu-oxidase | InterPro:Cu-oxidase_2 | InterPro:Cu-oxidase_3 | InterPro:CuRO_1_AAO-like |
| InterPro:CuRO_2_AO-like | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 |
| GO:GO:0009506 | GO:GO:0016491 | GO:GO:0016722 | GO:GO:0030312 | GO:GO:0055114 | InterPro:IPR008972 |
| UniProt:K4AVK0 | PFAM:PF00394 | PFAM:PF07731 | PFAM:PF07732 | PANTHER:PTHR11709 | PANTHER:PTHR11709:SF27 |
| SUPFAM:SSF49503 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc01g056310.2 | EnsemblPlants:Solyc01g056310.2.1 | UniParc:UPI000276354E | SEG:seg |
Description
No Description!
Coordinates
chr1:+:53293891..53295912
Molecular Weight (calculated)
61959.7 Da
IEP (calculated)
8.765
GRAVY (calculated)
-0.346
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGKVTVVA LLLCLSVGVI AEDPYLYFNW NVTYGTVSPL GVPQQGILIN GQFPGPRINC TSNNNIVVNV FNNLDEPFLF TWNGVQHRKN SWQDGTPGTM
101: CPIMPGQNFT YRFQVKDQIG SYYYFPTTAL HRAAGGYGAI NVHSRALIPV PFDNPADEYN VFVGDWYNKG HKTLKKVLDG GHTVGRPDGI IINGKSAKVG
201: EAKEPLFTME AGKTYRYRFC NLGMRSSVNV RLQGHPMKLV ELEGSHTVQN IYDSLDIHVG QCLSVLVTAN QEPKDYYLVV SSRFLKQELS SVAIIRYANG
301: KGPASPELPA SPPDNTEGIA WSMNQFRSFR WNLTASAARP NPQGSYHYGQ INITRTIKIV NSMGQVNGKL RYGLNGISHS DTETPLKLVE YFGAADKSFK
401: YDLMADEAPA DPSKLTVAPN VKNTTYRNFV EIIFENHEKS IRTYHLDGYS FFAVAVEPGR WSAEKRKNYN LVDATSRNNI QVYPNSWAAI MLTFDNAGMW
501: NLRSEMWEKT YLGEQMYFSV LSPSRSLRDE YNLPDNHPLC GVVKGMPLPA PYKA
101: CPIMPGQNFT YRFQVKDQIG SYYYFPTTAL HRAAGGYGAI NVHSRALIPV PFDNPADEYN VFVGDWYNKG HKTLKKVLDG GHTVGRPDGI IINGKSAKVG
201: EAKEPLFTME AGKTYRYRFC NLGMRSSVNV RLQGHPMKLV ELEGSHTVQN IYDSLDIHVG QCLSVLVTAN QEPKDYYLVV SSRFLKQELS SVAIIRYANG
301: KGPASPELPA SPPDNTEGIA WSMNQFRSFR WNLTASAARP NPQGSYHYGQ INITRTIKIV NSMGQVNGKL RYGLNGISHS DTETPLKLVE YFGAADKSFK
401: YDLMADEAPA DPSKLTVAPN VKNTTYRNFV EIIFENHEKS IRTYHLDGYS FFAVAVEPGR WSAEKRKNYN LVDATSRNNI QVYPNSWAAI MLTFDNAGMW
501: NLRSEMWEKT YLGEQMYFSV LSPSRSLRDE YNLPDNHPLC GVVKGMPLPA PYKA
001: MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA
101: GTMCPIPPGQ NFTYHFQPKD QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF LDSGRTIGRP DGILINGKSG
201: KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY
301: EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY
401: DTISDNPNPD QIKNIKIEPN VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV QVYPKCWAAI LLTFDNCGMW
501: NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC GLVKGKPKVN PYAGA
Arabidopsis Description
sks12At1g55570/T5A14_1 [Source:UniProtKB/TrEMBL;Acc:Q9ZVV4]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.