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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038521_P001 Maize extracellular, plasma membrane, vacuole 90.88 90.88
Zm00001d010630_P003 Maize extracellular, golgi, vacuole 89.98 88.25
HORVU4Hr1G048550.1 Barley cytosol, extracellular 9.66 85.71
HORVU1Hr1G069130.1 Barley extracellular, golgi, plasma membrane 76.57 76.43
TraesCS1A01G304100.1 Wheat extracellular, golgi, plasma membrane 74.96 74.96
TraesCS1B01G314600.1 Wheat plasma membrane 74.6 74.6
TraesCS1D01G303600.1 Wheat extracellular 74.24 74.24
EES01652 Sorghum extracellular, golgi, vacuole 72.45 72.58
GSMUA_Achr8P01580_001 Banana extracellular 60.64 65.7
GSMUA_Achr5P27810_001 Banana extracellular 61.72 65.46
GSMUA_Achr11P... Banana vacuole 61.72 65.46
GSMUA_Achr9P04930_001 Banana endoplasmic reticulum, extracellular, plasma membrane 61.0 65.08
VIT_00s1309g00010.t01 Wine grape vacuole 63.69 64.73
VIT_00s1643g00010.t01 Wine grape vacuole 63.69 64.73
Solyc05g055720.1.1 Tomato nucleus 10.38 64.44
CDY68876 Canola cytosol 12.88 64.29
Bra030849.1-P Field mustard cytosol 18.6 63.03
GSMUA_Achr10P... Banana extracellular, golgi 62.79 62.23
CDY68850 Canola extracellular 33.63 62.05
PGSC0003DMT400016672 Potato endoplasmic reticulum 60.82 61.37
KRH31599 Soybean extracellular 60.47 61.23
CDX82541 Canola extracellular, plasma membrane 60.64 61.08
Bra001503.1-P Field mustard extracellular, plasma membrane 60.64 61.08
Solyc01g056310.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 60.47 61.01
PGSC0003DMT400041845 Potato extracellular, plasma membrane, vacuole 60.82 60.93
CDY43352 Canola extracellular, plasma membrane 55.46 60.9
Solyc11g008860.1.1 Tomato extracellular 60.47 60.9
CDY56013 Canola endoplasmic reticulum, extracellular, plasma membrane 59.75 60.84
AT3G13390.1 Thale cress extracellular, plasma membrane, vacuole 60.29 60.83
CDX75708 Canola extracellular 59.93 60.8
CDY23596 Canola extracellular, plasma membrane 60.29 60.72
Bra030850.1-P Field mustard plasma membrane 59.57 60.66
CDY10549 Canola endoplasmic reticulum, extracellular, plasma membrane 59.57 60.66
AT1G55560.1 Thale cress extracellular 59.57 60.66
Bra001504.1-P Field mustard extracellular 59.75 60.62
CDX82540 Canola extracellular 59.75 60.62
CDX75707 Canola extracellular, plasma membrane, vacuole 60.11 60.54
CDY43995 Canola extracellular, plasma membrane 60.11 60.54
CDY49392 Canola extracellular 48.3 60.54
GSMUA_Achr9P16870_001 Banana extracellular, plasma membrane, vacuole 60.11 60.32
CDY24188 Canola endoplasmic reticulum, extracellular, plasma membrane 59.21 60.18
KRH50513 Soybean vacuole 59.03 60.0
Bra002825.1-P Field mustard extracellular, golgi, vacuole 59.39 59.93
AT3G13400.1 Thale cress extracellular, plasma membrane 59.03 59.89
CDY23597 Canola endoplasmic reticulum, extracellular, plasma membrane 59.03 59.78
Bra034679.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 59.03 59.78
CDY43994 Canola endoplasmic reticulum, extracellular, plasma membrane 59.03 59.78
CDY24189 Canola extracellular, plasma membrane, vacuole 59.21 59.75
AT1G55570.1 Thale cress extracellular, plasma membrane 59.21 59.64
CDX97352 Canola mitochondrion 52.06 59.63
Bra039389.1-P Field mustard plasma membrane 55.46 59.62
Bra039388.1-P Field mustard extracellular, plasma membrane, vacuole 59.03 59.57
CDY50029 Canola extracellular 57.42 59.44
KRH50514 Soybean endoplasmic reticulum, extracellular, vacuole 58.68 59.42
CDY43353 Canola extracellular, plasma membrane, vacuole 58.86 59.39
PGSC0003DMT400002554 Potato endoplasmic reticulum, extracellular, golgi 58.86 59.17
Bra038001.1-P Field mustard extracellular, vacuole 58.68 59.1
PGSC0003DMT400082031 Potato extracellular, plasma membrane, vacuole 58.86 59.07
KRG89471 Soybean mitochondrion 58.68 58.89
Solyc01g005510.2.1 Tomato extracellular, plasma membrane, vacuole 58.5 58.71
PGSC0003DMT400060352 Potato extracellular 57.96 58.7
Solyc03g063150.2.1 Tomato unclear 58.32 58.63
PGSC0003DMT400010905 Potato extracellular, plasma membrane 59.39 58.55
CDY54363 Canola extracellular 56.35 57.8
Bra034680.1-P Field mustard extracellular, plasma membrane 56.89 57.5
Solyc05g055710.2.1 Tomato extracellular 46.15 56.83
GSMUA_Achr3P09610_001 Banana plastid 61.0 55.81
CDY32795 Canola cytosol 10.38 55.77
Bra002824.1-P Field mustard cytosol 10.55 55.66
GSMUA_Achr5P07530_001 Banana extracellular, golgi, vacuole 61.18 54.72
Zm00001d047156_P002 Maize cytosol 19.68 54.46
EER97278 Sorghum extracellular, golgi 50.09 51.09
EER90222 Sorghum extracellular 49.55 50.73
EES12655 Sorghum extracellular 51.34 49.65
Zm00001d037444_P001 Maize mitochondrion 23.26 48.51
OQU88350 Sorghum extracellular 47.59 48.1
EER93966 Sorghum extracellular 47.05 43.91
EER92264 Sorghum extracellular 45.44 43.05
EER89036 Sorghum plasma membrane 44.9 42.54
KXG24449 Sorghum cytosol, nucleus, vacuole 37.57 41.58
Os05t0485800-00 Rice plasma membrane 45.26 37.15
Protein Annotations
Gene3D:2.60.40.420MapMan:50.1.10EntrezGene:8064152UniProt:C5YZW1InterPro:Cu-oxidaseInterPro:Cu-oxidase_2
InterPro:Cu-oxidase_3InterPro:CupredoxinEnsemblPlants:EES19711ProteinID:EES19711ProteinID:EES19711.1GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005618GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0009505GO:GO:0009506GO:GO:0016491GO:GO:0016722
GO:GO:0030312GO:GO:0055114InterPro:IPR008972PFAM:PF00394PFAM:PF07731PFAM:PF07732
PANTHER:PTHR11709PANTHER:PTHR11709:SF127EnsemblPlantsGene:SORBI_3009G177300SUPFAM:SSF49503unigene:Sbi.6132SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A88EEFRefSeq:XP_002441281.1SEG:seg::
Description
hypothetical protein
Coordinates
chr9:-:53220436..53222925
Molecular Weight (calculated)
62223.3 Da
IEP (calculated)
7.726
GRAVY (calculated)
-0.207
Length
559 amino acids
Sequence
(BLAST)
001: MATTTRAAAA AGVLLLVLSA LALVARAEDP YLFFEWKVTY GTKSLLGVPQ KVILINGEFP GPRINCTSNN NIVINVFNQL DHPLLFTWNG MQHRKNSWMD
101: GMPGTQCPIL PNTNFMYKWQ PKDQIGSFYY FPSMGMQRAV GGYGGISVYS RLLIPVPFDQ PPPENDHVVL IGDWYTKDHE VLARQLDAGK SVGRPAGVVI
201: NGKGGKDLES APLFTFDAGK TYRLRVCNTG IKASLNFRIQ GHHMTLVELE GSHTLQDVYD SLDVHVGHCL SVLVTADQKP GDYYMVASTR FIHDAKSARA
301: VVRYAGSSAP PPAEMPEPPA GWAWSINQAR SIRWNLTSSA ARPNPQGSYH YGQINITRTI RVMVSRGHID GKLRYGFNGV SHRDPETPVK LAEYFNVTDG
401: VFSYNQMGDV PPAVNGPLHV VPNVITAEFR TFIEIVFENP EKSLDSIHLD GYAFFGVGMG PGQWSPEARV TYNLLDAVSR HTIQVYPRSW TAIMLTFDNA
501: GMWSVRSNIW ERYYLGEQFY ISVISPEHSL RDEYNMPDND LRCGKVVGLP LPPSYSAAR
Best Arabidopsis Sequence Match ( AT3G13400.2 )
(BLAST)
001: MQGGRLLTVL VCLASTVALV SAGDPYFYYT WNVTYGTAAP LGIPQQVILI NGQFPGPNLN STSNNNVVIN VFNNLDEPFL LTWSGLQHRK NSWQDGVTGT
101: SCPIPAGTNF TYHFQPKDQI GSYFYYPSTA LHRFAGGFGG LRVNSRLLIP VPYADPEDDR TILINDWYAK SHTALKNFLD SGRTLGSPDG VLINGKSGKL
201: GGNNAPLFTM KPGKTYKYRI CNVGFKSTLN FRIQGHKMKL VEMEGSHVLQ NDYDSLDVHV GQCFAVLVTA DQVAKNYYMV ASTRFLKKEV STVGVMSYEG
301: SNVQASSDIP KAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGKINI TRTIKLANTK NLVNGKVRFG FNGVSHVDTE TPLKLAEYFG MSEKVFKYNV
401: IKDEPAAKIT TLTVEPNVLN ITFRTFVEVV FENHEKSMQS FHLDGYSFFA VASEPGRWTP EKRNNYNLLD AVSRHTVQVY PKSWSAILLT FDNAGMWNIR
501: SENWERRYLG QQLYVSVLSP EKSLRDEYNI PLNTNLCGIV KGLPLPTPYT I
Arabidopsis Description
sks13AT3g13400/MRP15_3 [Source:UniProtKB/TrEMBL;Acc:Q9LJF1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.